| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2849 |
|---|
| Symbol | |
|---|
| ID | 4286314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 3136197 |
|---|
| End bp | 3137066 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638142344 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_758068 |
|---|
| Protein GI | 114571388 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA CCCAGCCCTC CGCCGTTGTG ACAGGCGCAT CCACCGGCAT TGGCGCGGCT
TGCGCCAAAC GACTCGTCGA CGAAGGCTGG CGCGTGTTTG CCGGGGTCCG GAAGAACGAA
GATGGCGAGC GCCTCAAGGC AGAACTGGGC GCCAATCTGA TCCCGGTGAC CATCGATGTG
ACTGACACCG ACAGCGTCCG GGCCGCCGCA GCCATCGTCC GCGAGGCGCT GGACGGCCAG
ACGCTAAAGG GCCTGGTCAA CAATGCAGGG ATTGCGGTCG CGGGGCCGAT GCTGGAATTG
CCGATCGAGG AATTCCAGAA CCAGATGGAC GTCAATGTGA CAGGCATAGT CCGCGTCACA
CAGGCTTTCG GCCCGCTTCT GGGGGTCGAT GAAGGCCTGA CCGGCGGGCC GGGCCGCATC
GTCATGATGT CCTCGGTCGC CGGCGAAATG GGGGCGCCCT TCCTGGGCCC CTATGCAGCG
TCCAAACACG CCGTAGAGGG GATCAGCAAG TCGCTGCGGC GCGAACTGAT GCTCTATGGC
ATCGAGGTGA TCGTCATTGG TCCGGGTGCG GTGGCCACCC CGATCTGGTC AAAGGCCGAA
GAGATCGACA CGACGCCCTA CGAAAACAGT CCATTCTACG AGGCGATGAC CCGTATCCAG
GGCTGGATGG CGAAGAACGG CCCGGACGGG TTCCCGCCCT CCAAGATCGC CGACCGGGTT
TTCCGGGCCT TCACCGACGC CAAGCCGCGC TTCCGCTACG CCATTGTTCC GGACCGCCTG
ACCAACTGGT CCCTGCCCCG GATGCTGCCG GAGCGGATAG TCAACAACAT GGTCGCCAAG
CGGGTCGGAT TGCAGCGCAA GGGCCGCTGA
|
|---|
| Protein sequence | MSQTQPSAVV TGASTGIGAA CAKRLVDEGW RVFAGVRKNE DGERLKAELG ANLIPVTIDV
TDTDSVRAAA AIVREALDGQ TLKGLVNNAG IAVAGPMLEL PIEEFQNQMD VNVTGIVRVT
QAFGPLLGVD EGLTGGPGRI VMMSSVAGEM GAPFLGPYAA SKHAVEGISK SLRRELMLYG
IEVIVIGPGA VATPIWSKAE EIDTTPYENS PFYEAMTRIQ GWMAKNGPDG FPPSKIADRV
FRAFTDAKPR FRYAIVPDRL TNWSLPRMLP ERIVNNMVAK RVGLQRKGR
|
|---|
| |