| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2846 |
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| Symbol | sdhA |
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| ID | 4286311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 3133409 |
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| End bp | 3135196 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638142341 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_758065 |
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| Protein GI | 114571385 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAT ACAAATGGAT CGATCACACC TATGACGTGG TCGTCGTGGG CGCCGGGGGC
TCGGGCCTTC GTGCAGCGCT CGGAGCTTCC CAGGCCGGTC TGAAGACCGC CTGTATCACC
AAGGTCTTCC CGACCCGCTC GCACACGGTT GCGGCCCAGG GCGGGATTTC CGCCTCGCTC
GGAAACATGG GCGAGGATGA CTGGCGCTGG CACATGTATG ACACCGTCAA GGGGTCAGAC
TGGCTGGGCG ACCAGGACGC CATTGAATAC CTCTGCCGTG AAGCGCCGGC CGCCGTGTAC
GAGCTCGAGC ACTGGGGCGT GCCCTTCTCG CGCACCGAAG ACGGCAAGAT CTATCAGCGC
GCCTTTGGCG GCATGACCAA GAATTACGGC GAAGGCCCGG TCCAGCGCAC CTGTGCCGCT
GCCGACCGCA CCGGTCACGC CATCCTGCAC ACGCTTTATG GCCAGTCGGT TCGCAATGAG
ACCGAATTCT TCATCGAGTA TTTCGCGCTC GATCTGATCA TGGATGATGA CGGTGTCTGC
CGCGGTATCA CCGCCTGGAA GCTGGATGAC GGTACGCTGC ACCGTTTCCG CGCCCAGACC
GTGGTCCTGG CGACGGGCGG CTATGGCCGC GCCTATTTCT CCGCCACTTC GGCCCACACC
TGTACCGGTG ACGGCAATGC CATGGTGCTG CGCGCCGGCC TGCCGCTCCA GGACATGGAA
TTCGTGCAAT TCCACCCGAC CGGCATTTAC GGCGCCGGCT GCCTGATCAC CGAGGGCGCC
CGCGGCGAAG GCGGCTATCT GACCAATTCC AACGGCGAGC GCTTCATGGA GCGCTATGCC
CCATCCGCGA AAGACCTCGC TTCCCGCGAT GTGGTCTCAC GCTCGATGAC GATGGAAATC
CGCGAAGGCC GCGGTGTCGG CGCCAATGGC GACCATATCC ACCTCCATCT CGACCATCTC
GATCCGGACA TTCTGGGCGA GCGCCTGCCG GGCATTTCGG AGAGTGCGCG CGTCTTTGCC
GGTGTCGATG TGACCAAGGA GCCGATCCCG GTCCTGCCGA CGGTCCACTA CAATATGGGC
GGTATCCCGA CCAATTATCA CGGCGAAGTC CTGACCAAGG TCGGCGGTGA TGCCGATACG
GTCGTGCCGG GCCTGATGGC TGTCGGCGAA GCGGCCTGCG TCTCGGTGCA TGGCGCCAAT
CGTCTCGGCT CGAACTCGCT GATCGACCTC GTGGTCTTCG GCCGCGCCGC TGGCCTGCGC
CTGGGCGAGA CGACCAAGGC CGGTGCCAGC CAGCCGGAGA TCAAGAGCAC GGACGGTCAG
CTTTCGCTAG ATCGTCTCGA CAAGTACCGC AATGCCGCCG GCGGCACGCC GACCGCCAAG
CTGCGGCTGG AAATGCAGCG TTCCATGCAG AATAATTGTG CCGTTTTCCG GACGGGCGAC
GTGCTCGCCG AGGGCGTTGA GGCGATCAAA CAGGTCTATA CGGGCATGGC CGATATCGGT
GTCACCGACC GCACCATGGT CTGGAATACC GATCTCATGG AAACCCTCGA GATGGACAAC
CTGCTCAGCC AGGCGGCCGT GACGGTGAAC GGCGCGGCCA ATCGTGAAGA GAGCCGCGGC
GCCCATGCCC GCGAAGACTT CTCCGATCGT GACGACGAAA ACTGGATGAA GCACACGCTC
GCCTGGTGCG ACGAGGCCGG CAATGTGAAG ATCGACTACC GCCCGGTCCA CACCTACACG
ATGTCCAATG ATATCGAGTA CATCAAGCCG AAGGCGCGGG TTTACTAG
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| Protein sequence | MAEYKWIDHT YDVVVVGAGG SGLRAALGAS QAGLKTACIT KVFPTRSHTV AAQGGISASL
GNMGEDDWRW HMYDTVKGSD WLGDQDAIEY LCREAPAAVY ELEHWGVPFS RTEDGKIYQR
AFGGMTKNYG EGPVQRTCAA ADRTGHAILH TLYGQSVRNE TEFFIEYFAL DLIMDDDGVC
RGITAWKLDD GTLHRFRAQT VVLATGGYGR AYFSATSAHT CTGDGNAMVL RAGLPLQDME
FVQFHPTGIY GAGCLITEGA RGEGGYLTNS NGERFMERYA PSAKDLASRD VVSRSMTMEI
REGRGVGANG DHIHLHLDHL DPDILGERLP GISESARVFA GVDVTKEPIP VLPTVHYNMG
GIPTNYHGEV LTKVGGDADT VVPGLMAVGE AACVSVHGAN RLGSNSLIDL VVFGRAAGLR
LGETTKAGAS QPEIKSTDGQ LSLDRLDKYR NAAGGTPTAK LRLEMQRSMQ NNCAVFRTGD
VLAEGVEAIK QVYTGMADIG VTDRTMVWNT DLMETLEMDN LLSQAAVTVN GAANREESRG
AHAREDFSDR DDENWMKHTL AWCDEAGNVK IDYRPVHTYT MSNDIEYIKP KARVY
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