| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2768 |
|---|
| Symbol | |
|---|
| ID | 4286199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 3048523 |
|---|
| End bp | 3049734 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638142263 |
|---|
| Product | Sel1 domain-containing protein |
|---|
| Protein accession | YP_757988 |
|---|
| Protein GI | 114571308 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACGA GAATTCTGCT TGGCGCCGGC GCTGCGGTCC TAGCCGCCGT CATCGGCTTC
GCGATGTATC AATGGTCGTC GCAATCCGGC CTTTCCGAGG CTCAAATGGC CGCGCGCATG
GAGGAGGCCG AGGCCGCATT TGCCCGCACC GACTACGCGG AAGTTGCTGA AATTCTAACA
GAATTGTCGG AGGCTGGTTT GCCTTTGGCG CAATATCGTC TGGGCCTGAT GTACCGCGAA
GGTCGCGGCG TGGAGATCAA TCCGGATCGC GCGATCTCGC TGCTTGAAGG CGCCGTTGCG
CAAGAATGGC CCGCGGCTGA GGAGGCGCTG GTCGCCCTGT ATCTTGAGCG CGCCGAAGCT
GCATCCGAAC CGCCAGAGGA AATTGTCTGG CTCGAGCGGG CGGCGCGTCG CGGCGATATC
GGTGCGTCCG CGGTGATGGG TTCATACTAT TTTTCCGGTA CCGGCGTTGA GCGCGATATT
GCCAGGGGTG TTCGTTTGCT CACTGAAGCC GCCGAGGCGG GTGATGTCCG TGCCCAGTCC
AATCTTGGCT ATGCCTATTC GACGGGGACG GGTGTCGCGC AAGACGATGC GCGTGCACTG
AATTGGTACC GGATGGCGGC AGAGGCCGGC ATGGTTCGCG CGCAGGCTGC GGTCGGTCTG
TTTTACGAGA CGGGCCGCGG TACTGAGCCG AACATAGCCG AGGCTGTGCG TTGGTATTTG
AACGTGGTCG GAGAAGGTGT GCCCGGCATA AGCGCCCGTC TCGGTGCGCT GGTCGCCTCC
GGTGAAATCG GGGCCGAGCA GTATCCGAAC GCGCAGACCT GGGTGCTGGA GGCGGCGCGT
GCCGGTGACA GCGCGTCCCT GCTCTGGACC GAGGAACGTG CCGAAGCAGG TGATGCGGCG
GCGCTGAACG CCTTGGCGGT CATGTACGAG GCGGGCGAAG GCGTTCCGCA GCATGATGTC
CGCGCGCTTG ATTACTTCCG TCGGGCGGCA GATGCTGGCT CACCGTCTGC CCAGCTGGCC
ATGGCGCGTC GGTTTGCGGC CGGTCAGGGT GTGACTCAGG ATTATATGCG GGCTCATGTC
TGGGCCAATC TGGCAGCCGC CAGGGGCGCC TCCGAGGCGG CTCGCGAGCG TGATGTGTTC
GCCCGTTTCC TGACGCCGGA GCAATTGGCC GAGGCGCAAA ACCGAGCGGC TGACTGGCAG
CCGTCGCAAT AG
|
|---|
| Protein sequence | MRTRILLGAG AAVLAAVIGF AMYQWSSQSG LSEAQMAARM EEAEAAFART DYAEVAEILT
ELSEAGLPLA QYRLGLMYRE GRGVEINPDR AISLLEGAVA QEWPAAEEAL VALYLERAEA
ASEPPEEIVW LERAARRGDI GASAVMGSYY FSGTGVERDI ARGVRLLTEA AEAGDVRAQS
NLGYAYSTGT GVAQDDARAL NWYRMAAEAG MVRAQAAVGL FYETGRGTEP NIAEAVRWYL
NVVGEGVPGI SARLGALVAS GEIGAEQYPN AQTWVLEAAR AGDSASLLWT EERAEAGDAA
ALNALAVMYE AGEGVPQHDV RALDYFRRAA DAGSPSAQLA MARRFAAGQG VTQDYMRAHV
WANLAAARGA SEAARERDVF ARFLTPEQLA EAQNRAADWQ PSQ
|
|---|
| |