| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2720 |
|---|
| Symbol | |
|---|
| ID | 4286085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 2981653 |
|---|
| End bp | 2984682 |
|---|
| Gene Length | 3030 bp |
|---|
| Protein Length | 1009 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638142219 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_757944 |
|---|
| Protein GI | 114571264 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000258905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.119134 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTACA AAGGGATGAG GGAGCGTCCG ATGCGGGGGC TCCGAACTGG ATTGTGGCGG
GGGGCGAGCC TCGCAGCCAT ATCCATTGCG ATGGTTTCGA CGAGCGTTTA CGCGCAGGAT
GTCGAGGACG AAGACGATAG CAATACCGAG GTGATCACGG TGCGGGGTAT CCGCTCCAGC
CTGCAAAGCG CCCAGGAGAT CCGCCGCAAT TCCGACGTTC TTGTGGACGC GATCACGGCC
GAGGATATCG GCGCTTTGCC GGACCGTTCG GTCGCGGAAG CGTTGCAGCG CGTTCCGGGT
GTGAACATCA CGCGGTTTGA AGGTGAAAAC GACCCAGACC ATTTCTCGGT CGAAGGGTCC
GGCGCGATCA TTCGTGGCCT CAACTTCGCC CGCAGTGAGC TGAACGGTCG GGACGTGTTC
TCTGCCGATA ATGGTCAGCA AATCGGCTTC AACGATGTTT CGCCGGAAAT GCTTGGATCG
GTTGAAGTAT TCAAGAACCA GTCGGCCGAC ATGATCGAAG GCGGGCTCGC CGGTACGGTG
AACCTCAATA CACGCCTCCC GTTCGACCAG GGTGGTCGCA TGATGGCGTT CACCCTCGAG
GCGAACTACT CGGATTTCGC CGAGGAAGTC ACGCCCACGA TGTCGGGCAT CTACAGCAAT
CGCTGGGAGC TGGGGAATGG GTCTGAATTC GGCCTCATCT TTGGCGCCTC CTATTCCGAG
CTGCAAAGCC GCGCTGATGG TACGCTCGTC GCTGAATGGC TCGATCGGGA CCCTAGTGAC
GGCCAAAGCC TCTACGTGCC GTCTGGCGCT GGGATCCGGA CGCAGTTGTT TGACCGGACA
CGAGACTCGA TTTCCGCTGC CGCTCAGTGG CGCAGTGCAG ACGGTGAATT GGAGGCGACG
GCGCAATTCT TCCGGGCTTC CTATGAAAAT GCCTGGTCGG AACGCGCGGT TGAGCCGTCC
ATCGACAGTG GGCCCGCAAT CACGCCGGCT CCGGGTACAA GCTTCACCTA TGACGACAAT
GGTCTGTTCG AGAGCGGCGT GATCTCGGAG AATGTCGGTT GGCGTTCGAA TGATCCGACT
CATCCGCTGA ACGGCGTTCG CCAGCTCGCC CTTGCACGGG GCAAGACGGA TGAAAGTCTG
ACCACCGACA TCGGATTCAA TCTCCGCTGG TCGCCGACTG ACCGCTTCCG CGCCAGTTTT
GACCTGCAGT TCGTTGAGTC CGAAGTGAAC ATCGCGGATG TTACGGTCCA CGGCGCGTTT
TTCTCGGACA TTGATCTGGA TGTGACCGGT GATGTGCCCA GCGTGATCTA CCGCCGTCCT
GCTGACGGCT CGGATCCGTA TTTCTCTGAC GCCAGCAACT ACTACCTTCG CTCGGCTATG
GACCATCTCT CGGACAATGA AGGCGAATCG GTCGCCTTCC GTGCTGACGC CGAATATGAT
TTCGAAGGCG ACAGCTGGCT GAGGTCCGTG CGCTTTGGTG GCCGTGTTTC CAACCGGGAG
CAGGTTGTAC GCAGCTCGGT CTATAACTGG GGCAATATTT CGGCGACATG GAACTCGCCG
TTCGCTCTGG ACAATCCGGC CATCCCGCCG GGAACATTCG AGCTCTATAA CTTCGATAAT
TACATGCGTG GCATGACAAC CGGCCTTGAG GGCGGCATCC CGATGTATAC TGGCGCTCTG
GGCGAGGATT ACGACCAGGC TGTCGCTGCC ATCATGGCGA TGCGTAACGC GGCTGGAAAC
GGTGGCTGGG TGCCGCTGGC CCAGCGTGGT GGTGTCGTGG CAGGGACGCC ATTCCTGCCG
TCCGAGATTA CCGATGTGAC GCAGGATACG ACGGCATTCT ATGGCCGTCT GGACTTCGAC
AATGAACATC GGTCCGACGG CATTCGCATT TCAGGCAATG TCGGCCTTCG TTATGTCGAA
ACCCAGACCA GTGCCGTTGG TGCGCTCTCA TTCCCGGACC GTGCCCTGGT GTTCAACGGT
ATGACGCCGG CGGCCTATTG TGCCGGTATC GTCGGTACTA CGCCCGGTAT CTGCCTCGAG
GGTGCGGCAA CGCAGACGGC CTTCTATGAC TGGGCGGATG GCAGCAACCA GTCCAACACC
GACAGCCACA CCTATGAGAA TTGGCTTCCC AGCGCCAATG TGGTGTTCGG TATCACGGAC
GAATTCCAGA TCCGCCTGGG TCTCTCCCAG GCCATCTTCC GTCCTGATTT CGGCCTGATG
AAAAGCAATC TGGTCATTCA GCAAGGCGGC GATGACCCGG TGACCGGCGC GTGGCTGGGG
CCGGACGCCT CAACCGGCAA CGTTCAACTT GACCCGATCA CGGCCGACCA GTTTGACCTC
GCATTCGAAT GGTATTTCGA TGATGTTGGC TCGCTGACCT TCTCCTTGTT CCAGAAAAAC
CTGAGCGACT ACATCGTTCC GGCCATCCTG CAACGGGATG TCACAAACAA TGGCGAGACA
TTTGCCGTTG ATGTCGACGG TGTCGGCAAT GCGTCGGACA GTGGCGAGAT CAAGGGCTTC
GAAATTGCCT ATCAGCAAAC CTTCGATGAC CTGCCCGGCA TATGGTCAGG ATTGGGCGTC
CAGGCGAACT ACACCTATAT CGACGCTCAG GGTGTGCCGA ACATCGGTCC CAAGAATGAC
GAGCCGAACG GGCGTGGCTC CGCGCCTAAC TTCGACGTGT CACAGTTGCG CCTGCCGCTC
ATGTCCGAGC ACACGGTCAA CCTGGTCGGC TTCTACGAAA CCGACAGCTG GAGCGCCCGT
CTCGCCTATA ATTGGCGTTC GGAATACACG CTGACTGTTC GTGACGTGAT CTATCCGTTC
ACCCCTGTCG TTCATGAGAG TACGGGTCAG CTTGATGGCT CAATCTTCTA CGACATCACG
GACAGTCTGA CTGTCGGTGT CCAGGCGGTG AACCTGCTGG ATGAGGTTTC TGAAACCAGC
GCGGTCATCA ATTCGAACCT GGTGCAGGCA CCGCGGGCCT ATTTCCGCAA TGACCGGCGC
TTCGCATTCG TCTTGCGCGG CCGCTTCTAA
|
|---|
| Protein sequence | MFYKGMRERP MRGLRTGLWR GASLAAISIA MVSTSVYAQD VEDEDDSNTE VITVRGIRSS
LQSAQEIRRN SDVLVDAITA EDIGALPDRS VAEALQRVPG VNITRFEGEN DPDHFSVEGS
GAIIRGLNFA RSELNGRDVF SADNGQQIGF NDVSPEMLGS VEVFKNQSAD MIEGGLAGTV
NLNTRLPFDQ GGRMMAFTLE ANYSDFAEEV TPTMSGIYSN RWELGNGSEF GLIFGASYSE
LQSRADGTLV AEWLDRDPSD GQSLYVPSGA GIRTQLFDRT RDSISAAAQW RSADGELEAT
AQFFRASYEN AWSERAVEPS IDSGPAITPA PGTSFTYDDN GLFESGVISE NVGWRSNDPT
HPLNGVRQLA LARGKTDESL TTDIGFNLRW SPTDRFRASF DLQFVESEVN IADVTVHGAF
FSDIDLDVTG DVPSVIYRRP ADGSDPYFSD ASNYYLRSAM DHLSDNEGES VAFRADAEYD
FEGDSWLRSV RFGGRVSNRE QVVRSSVYNW GNISATWNSP FALDNPAIPP GTFELYNFDN
YMRGMTTGLE GGIPMYTGAL GEDYDQAVAA IMAMRNAAGN GGWVPLAQRG GVVAGTPFLP
SEITDVTQDT TAFYGRLDFD NEHRSDGIRI SGNVGLRYVE TQTSAVGALS FPDRALVFNG
MTPAAYCAGI VGTTPGICLE GAATQTAFYD WADGSNQSNT DSHTYENWLP SANVVFGITD
EFQIRLGLSQ AIFRPDFGLM KSNLVIQQGG DDPVTGAWLG PDASTGNVQL DPITADQFDL
AFEWYFDDVG SLTFSLFQKN LSDYIVPAIL QRDVTNNGET FAVDVDGVGN ASDSGEIKGF
EIAYQQTFDD LPGIWSGLGV QANYTYIDAQ GVPNIGPKND EPNGRGSAPN FDVSQLRLPL
MSEHTVNLVG FYETDSWSAR LAYNWRSEYT LTVRDVIYPF TPVVHESTGQ LDGSIFYDIT
DSLTVGVQAV NLLDEVSETS AVINSNLVQA PRAYFRNDRR FAFVLRGRF
|
|---|
| |