| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2705 |
|---|
| Symbol | |
|---|
| ID | 4286105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 2964503 |
|---|
| End bp | 2966029 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638142204 |
|---|
| Product | respiratory nitrate reductase beta subunit |
|---|
| Protein accession | YP_757929 |
|---|
| Protein GI | 114571249 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1140] Nitrate reductase beta subunit |
|---|
| TIGRFAM ID | [TIGR01660] nitrate reductase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.59941 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.077732 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCC GTGCGCAAAT TGGCAAGGTC CTCAATCTGG ACAAATGTAT CGGCTGCCAC
ACCTGTTCCG TGACCTGCAA GAATGTCTGG ACCAGCCGCG AGGGCGTTGA ATACGCCTGG
TTCAACAATG TCGAGACCAA GCCGGGTGTC GGCTATCCCA AGGACTGGGA AAACCAGGGC
CGCTGGAATG GTGGCTGGAA ACGGTCCGGC AACGGGTCGC TTCATCCGAA AATGGGATCG
AAATGGCGGG TCCTGGCGAA GATTTTCGCC AATCCGGACC TGCCGCAGAT CGATGATTAC
TACGAGCCGT TCACCTTTGA TTACGGTCAC CTGCAATCGG CCAAGGAGTC GAAAGCCTTT
CCGACCGCCC GACCGCGCTC GCTGTTGACC GGCGAGCGGA TGGAAAAGAT CGAATGGGGT
CCCAACTGGG AGGAAATCCT CGGCGGAGAA TTCTCCAAGC GGTCCGAGGA CTACAATTTC
GAGGGCATCC AGAAGGAGAT TTACGGCGAG TTCGAAAACA CTTTCATGAT GTATCTGCCG
CGTCTGTGTG AGCACTGCCT CAACCCGACC TGCGCGGCGG CTTGCCCCTC TGGTGCGATC
TACAAGCGCG AGGAAGACGG CATTGTCCTG ATCGACCAGG AAAAATGTCG TGGTTGGCGC
ATGTGCGTGT CCGGCTGCCC GTACAAGAAG ATCTATTACA ACTGGTCGAG CGGCAAATCC
GAGAAGTGCA CCTTCTGTTA TCCGCGTATC GAGGCGGGTC AGCCGACCGT ATGTTCGGAG
ACCTGTGTCG GCCGGATCCG TTATCTCGGC GTCATGCTCT ACGATGCCGA CCGCATCGAG
GCAGCGGCCT CGATGGAAGA CGAGAAGGAT CTGTACCAGG CCCAGCTCGA CATCTTCCTC
GATCCGCATG ATCCGGAAGT TCAAGCCCAG GCGCGCCGGG ACGGCGTGCC GGAAGCCTGG
CTGGAAGCGG CCAAGCAGTC GCCGGTTTAC AAGATGGCGA TCGACTGGAA GGTCGCTTTC
CCCCTTCACC CTGAATACCG CACCTTGCCG ATGGTCTGGT ATGTGCCGCC CCTGTCGCCG
ATCAAGAACG CGGCCGAGTC CGGCGCGCTC GAGACCGATG GCGAGATGCC GGACGTCCGG
TCCCTGCGCA TCCCGCTTCG CTATCTGGCC AATCTGCTGA CGGCCGGGGA TGAGGAGCCA
GTCGCGCTGG GTCTCGAACG CATGCTCGCC ATGCGGGCCT ACATGCGGTC GAAAACGGTT
GAGGGCGTGA TCGACGCGTC GATCGCCGAA CGGGTCGGCC TCACCGAGGA TCTGATCGAA
GACATGTACC AGATTATGGC GATCGCCAAT TACGAGGATC GTTTCGTCAT TCCGACCTCG
CATCGCGAAG AGGCGGAAGA AGCCTTCGAT ATCCGGGGCG AGTGCGGGTT CAGCTTCGGC
AATGGCTGTT CGGACGGGCA GAGCAAGGCC TCGCTGTTTG GCAGCCCGCG ACGCCGCGCC
CAGGTCACCC CGATGGAGAA AAGCTGA
|
|---|
| Protein sequence | MKIRAQIGKV LNLDKCIGCH TCSVTCKNVW TSREGVEYAW FNNVETKPGV GYPKDWENQG
RWNGGWKRSG NGSLHPKMGS KWRVLAKIFA NPDLPQIDDY YEPFTFDYGH LQSAKESKAF
PTARPRSLLT GERMEKIEWG PNWEEILGGE FSKRSEDYNF EGIQKEIYGE FENTFMMYLP
RLCEHCLNPT CAAACPSGAI YKREEDGIVL IDQEKCRGWR MCVSGCPYKK IYYNWSSGKS
EKCTFCYPRI EAGQPTVCSE TCVGRIRYLG VMLYDADRIE AAASMEDEKD LYQAQLDIFL
DPHDPEVQAQ ARRDGVPEAW LEAAKQSPVY KMAIDWKVAF PLHPEYRTLP MVWYVPPLSP
IKNAAESGAL ETDGEMPDVR SLRIPLRYLA NLLTAGDEEP VALGLERMLA MRAYMRSKTV
EGVIDASIAE RVGLTEDLIE DMYQIMAIAN YEDRFVIPTS HREEAEEAFD IRGECGFSFG
NGCSDGQSKA SLFGSPRRRA QVTPMEKS
|
|---|
| |