| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2652 |
|---|
| Symbol | |
|---|
| ID | 4285983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 2891741 |
|---|
| End bp | 2892916 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638142151 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_757876 |
|---|
| Protein GI | 114571196 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA TCACCGACCG CGCCCTCACC GGCCTCAAGG TCGTCGAACT GGCGCGGGTC
CTGGCGGGCC CCTGGGTCGG TCAGACCCTG GCCGATCTTG GCGCCGATGT GATCAAGGTT
GAGAGCCCCG CCGGCGATGA CACCCGGACC TGGGGCCCGC CCTGGATCGA TCATGAAAGC
GGCCGGGCAG CGGCCTATTA CCATTCCTGC AATCGCGGCA AACGCTCGGT GACCGCCGAT
TTCCGCAAAC CCGAGGATCT TGATTTCGTC CGCACCCTGA TCGCCGATGC CGACGTCGTC
GTCGAGAATT TCAAGGTCGG AAGCTTGGCC AAATTCGGAC TCGATCATCC GAGCCTCGCT
GCCGATCATC CCCGGCTGGT CTATTGTTCG ATCACCGGCT TTGGCCAGAG CGGCCCCTAT
GCCCACCGGG CCGGCTATGA CCTCGCCATC CAGGCCATGA GCGGCATCAT GGATCTGACC
GGGGAGGCGG ACGGCCCACC GCAAAGACTG GGCGTTGCCT TCGCCGACAT ATTCACCGGC
CTCTACGCCA CCATTGCGAT CCAGGCTGCC CTGGCACAGC GCGAACGCAC AGGTCAGGGC
CAGTATATCG ACATGGCCCT GCTCGACTCG ATGATCGGCG TTCTGGGCAA TCAGGCGATG
AACTACTTCG CCACCGGCAC ATCTCCGCGC AGGATCGGCA ATGCCCACCC GTCCATCGTC
CCCTATCAGG AGTTCGCCTG CGCCGATGGG CATATCATCA TCGCGTGCGG CAATGACGGC
CAGTTCGAGC GGCTGGCCCA CGCACTGGCG CTGGGTGACG ATGTCCTTTC AGCCAACCGG
ACCAATGCCC AACGCGTCGG CAACCGGGCC AAGCTCGCGG CCCTGATGTC CGACAGGCTG
GCGGCGATGC CGCGGTCAGA CGCACTGGCA ATGCTGGAGG CCAATGGCGT CCCGGCGGGC
CCGATCAACA CGGTCGCCGA GGCCTTCGAT GACCCGCAAG TCCGGCATCG TGGACTTGAG
ATCACCTCGG ACGGCATTCC GGGACTGCGC TCACCGATCC GGATGTCGGA CAGCGATACG
GGTGCTACAG GCCGTGCTCC CGCACTGGGC GAACACACCG AGATAGTGAA GGCCGAGCTG
CGGAAAAAAG GATGGGGCGG GCCCGCTGGG AAATAG
|
|---|
| Protein sequence | MSEITDRALT GLKVVELARV LAGPWVGQTL ADLGADVIKV ESPAGDDTRT WGPPWIDHES
GRAAAYYHSC NRGKRSVTAD FRKPEDLDFV RTLIADADVV VENFKVGSLA KFGLDHPSLA
ADHPRLVYCS ITGFGQSGPY AHRAGYDLAI QAMSGIMDLT GEADGPPQRL GVAFADIFTG
LYATIAIQAA LAQRERTGQG QYIDMALLDS MIGVLGNQAM NYFATGTSPR RIGNAHPSIV
PYQEFACADG HIIIACGNDG QFERLAHALA LGDDVLSANR TNAQRVGNRA KLAALMSDRL
AAMPRSDALA MLEANGVPAG PINTVAEAFD DPQVRHRGLE ITSDGIPGLR SPIRMSDSDT
GATGRAPALG EHTEIVKAEL RKKGWGGPAG K
|
|---|
| |