Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_2568 |
Symbol | |
ID | 4285109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 2784277 |
End bp | 2785041 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638142067 |
Product | diguanylate cyclase |
Protein accession | YP_757792 |
Protein GI | 114571112 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACAGAA TCGAATTGGA ACGTGCCATG CGCATCGGAC CGACCTCCCC GACCGGGAAC ATCTCCCGTC CCGGCAAGAC CGACAAAGCC CGACCTGGCA GCGAGACACG CGCGAGTGCC GCGCCGTCGG ACGCAGCCTC CATCATGGGC GTGCCGGAAG CCGAGCTGAC ACCGAATGTC CAACGCGCCC TGCTGTCACT GATGGGCGAA GTCGACCAGC TCCGCAAGGA AACCGAACGC CTGCGCGGCC GCGTCCGTGA ACTGGAATCC CTGGCCGATC ACGACGTCAT GCTGCCGGTG CTGAACCGCC GCGCCTTCCT GCGCGAAGTC AGCCGCGCGC TGGCGCTGGC CGAACGCCAC AACGCACCGT CCGCCCTGGT CTATTTCGAC CTCAACGGCT TCAAGGCGAT CAATGACCAG TACGGTCATG CCGCCGGCGA CGCCGCGCTG CACCATGTCT CAAACCTGCT CACGGCCCAT ATCCGCGAGA CCGACGCGGT CGGGCGCCTG GGGGGCGATG AATTTGCCGT TGTGCTGACG CTAACCGGCC CCGACGGCGC TCAAGTGAAA GCCCAGGAGT TGGCGGACCG GATTTCGACG ACACCCTTCG ACTATGCCGG ACGCCAACTG ACGGTCGGCA CGGCCTGGGG CTGTCAGCCC CTTCAGGCTG GCGGCAAGGC CGAGGATGTG ATGGCGAGTG CCGACGCGGC GATGTATGCA TGCAAGCAGG CGCAAAGGTC CGACGCCGAG CGCAAACAGG CCTGA
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Protein sequence | MNRIELERAM RIGPTSPTGN ISRPGKTDKA RPGSETRASA APSDAASIMG VPEAELTPNV QRALLSLMGE VDQLRKETER LRGRVRELES LADHDVMLPV LNRRAFLREV SRALALAERH NAPSALVYFD LNGFKAINDQ YGHAAGDAAL HHVSNLLTAH IRETDAVGRL GGDEFAVVLT LTGPDGAQVK AQELADRIST TPFDYAGRQL TVGTAWGCQP LQAGGKAEDV MASADAAMYA CKQAQRSDAE RKQA
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