| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2558 |
|---|
| Symbol | |
|---|
| ID | 4286580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 2776454 |
|---|
| End bp | 2777854 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638142057 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_757782 |
|---|
| Protein GI | 114571102 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.246034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCA TCTATCTCAT CGCCCGCCGC GAATTCCTCT CCTATGTCGC CACCTGGGGC
TTCTGGCTGT CGCTCGCCTC TGTGCCGATG TTCATGGCGC TGGGCATCGG CATGCCGATC
CTGATCGAGA ATTCCCAACC CACCCGCTAT TACGTCCTCG TCGACGAGAC CGGCGGCACG
CTGGAAGCGG CGCTGGAAGC CCAGGCCGAG GCCAGTCGGG CCGAAGCGCT GGAGAGGGCG
CGCGAGGCGG CCCGGGAGAT GTTCGGGAAC AACCCGCAGA TCGAAGCCGC CTTGGCCTCC
CAGCCGCAAT TTTCTGACGA ACGCTATCTG CGGGTCGATG TCGGCGAGAC CGAGCTGGAG
GCGCTTCGGC CCTATCTGAC CGGCGGCGCC AGCTTTACAG CGGCCGATGG CGAGCACGGC
CTGTTCGCTG CCATCTTCCT GCGCCAGGGC GCGGATGGGG CGATTGAGGT CGATTACTGG
AGCACCAACC TCTCGGACAG TAATCTGCGG TCCCAGATAC GTAACTCCCT GCGCGGCCAT
ATGCGGACCC AGTTTCTCGT CGATGCCGGT GTGAACCCGC AATTGATCGA GACCGCCAAT
GATCTCTCGC CCACGGTGCG CGAACTCAAT GCCGGGCGTA CCGGCGACAC GGCTGAAGTG
ACCGACGCGG ACAAGATCCC GCTGTTCGTG AGCTTGTTCA CGGCTCTTGG CCTCTGGGTC
ATCATCTTCT CGGTGGTCAA CATGCTGCTG AGCGCCATGA TCGAGGAGAA GGGCAACAAG
ATCCTGGAAA TGATGCTGGC GTCGACCCGG CATCATGAAA TCCTCACCGG CAAGCTGCTT
GGCGTGGCTG CGGTTTCAGC AACCCTGCTG GTTGTCTGGG GCGGGATGGG CCTGCTGGGA
ACGGTCGGCA TGCAACAGGT CGCAGCCTCG GCCGACATGC CGATTGCGGA AATTCTGGCG
GCCGTGCTCA ATCCGGGCCT GCTGTTGCCG GCCCTGGGTT ATTTCATCAT CGGCTATTTG
ATGTATGGCG CGCTTTTCCT GGCCATCGGC TCGCTGTGCG AAACGCTACA GGACGCCCAG
ACCCTGATGA CCCCGATGAT GCTGATCATG ATGGTCCCGA TCTTCCTGGT CATGATGGCC
TTCGAGTCCC CGGACTCACC GGTCGTGGCG ATTGCCAGCT GGGTGCCGCT GTGGACGCCC
TTCATCATGC TGGCGCGCCT GCCGCATGAG GTCGGCATGG TCGAAATCCT GGGCACCACG
GCCGCAATGT TCGCCTTTGC CGCCTTCGTG ATCTGGGGCT CTGGCGTGCT GTTCCGCATG
GGTGCGCTCA ACCAGGCCAA CCAGGACACG GTGAAGGGCT GGTTCAGCCT TGGCGGCAAG
AAGAAGCCGG CGGAGGGCTG A
|
|---|
| Protein sequence | MRAIYLIARR EFLSYVATWG FWLSLASVPM FMALGIGMPI LIENSQPTRY YVLVDETGGT
LEAALEAQAE ASRAEALERA REAAREMFGN NPQIEAALAS QPQFSDERYL RVDVGETELE
ALRPYLTGGA SFTAADGEHG LFAAIFLRQG ADGAIEVDYW STNLSDSNLR SQIRNSLRGH
MRTQFLVDAG VNPQLIETAN DLSPTVRELN AGRTGDTAEV TDADKIPLFV SLFTALGLWV
IIFSVVNMLL SAMIEEKGNK ILEMMLASTR HHEILTGKLL GVAAVSATLL VVWGGMGLLG
TVGMQQVAAS ADMPIAEILA AVLNPGLLLP ALGYFIIGYL MYGALFLAIG SLCETLQDAQ
TLMTPMMLIM MVPIFLVMMA FESPDSPVVA IASWVPLWTP FIMLARLPHE VGMVEILGTT
AAMFAFAAFV IWGSGVLFRM GALNQANQDT VKGWFSLGGK KKPAEG
|
|---|
| |