| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2500 |
|---|
| Symbol | |
|---|
| ID | 4286626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 2721521 |
|---|
| End bp | 2722822 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638141998 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_757724 |
|---|
| Protein GI | 114571044 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC GCAAGATCGA GTTCAAGAAA CTGACCCAGG ATGAAGTCGA CGCGATTTGC
GCCCGGCACG AACGCCTGTG GTCGGGGCGC TCCGGTGGCG CACGGGCCAA TTTCTCCTAC
ACCATTCTCG AAAACATGGT GCTGGCCAAT CGGGACCTGT CCGATGCCGA CTTCAGCGGT
GCCGTGTTGC GCGGTGCCGT CCTGTCCGGA GCCACGCTCA ATAGCGCGGT CTTTTTCGCC
GCCGATTTGC GGCGTGCCAA TCTGGAAGGC GCGTCCCTGA GACGGGCGGA CTTGCGCGGT
GCCATCATGC GGGGCGCCAA CCTAACCGGG GCTGACCTGA CCGAGGCTGA TATGCGCGAA
GGTGCGATCG CCCAAATGGA CAAGGAAAAG GGCCTCGCGG TCCTGACCCA CAAAACCCAG
GAAAACGATG CCGGGACCGC CAATTTCACG GGGGCCAATC TCTCGCACTC GAAAATGGCC
GGAATCGCCG CCCAAAAAGC CGACTTCACT GACGCCATGC TGCTGGGCAC CCGTTTGATC
CGGGCCAATC TGCGCGGATC ATCCTTTCAA GGCGCCAATC TCGAAGGCGC AGACATGTCC
GGCGCGGACC TGTCCGATAC TGATTTCACG CATGCCGTTT TGATCGGCAC GAAGACCGTG
ATGGCCAAGA CCCAGGGCAT GAACACCGAC GGCGCGTTGA CCAATGCGGC GGTCGGTATT
GATCCTGAAG CTCTGGAACA GCCTGTTGCC GACCAAATCG CCGAACATGT CCGCTGGTGT
GAAACCAATG GCAAGGAAGG CAAGCCATCC CTGTTCGACG GGACGGATCT CCGTGGCCTG
ACATCCCTCG CCGGGAAAAC ACTGACCGCC TTTCATGCGC GTGGCGCGAC ACTTTACGGC
CTGGACCTGG AGGGCGCGCA GCTGCAGGGC GCTCGCCTTG AAAAAGCCGA CCTGCGGATG
GTCAGCCTGC GTGGCGCGGA CCTGCGTGGA GCCGATCTTA CCGGCGCCAA CCTTTCAAAT
GCCGACCTGC GTGACTGCCA ACTTGGGCCG CTTCTGCTCG ATGGCAACCG GGTTCTTCCG
GCCTCGCTCG CCGGGGTGCG GGCACGCTAT ACCGATCTGC GGGGCGCCGA CCTGCGTCAG
TTGAAGGCGA CCGGCGCCGA TTTTTCCTAC GCCACCCTCA ACGGGACCAA TGTGAAAAGG
GCGAGCTTCA ATGGCTCCTG CTTCACGGGT GCCCGTATCG ACGAGGACTT CTCCACCCAG
GTTGACTCCC TGGACGGCGC CGTCGATCTC GACGCGGCCT GA
|
|---|
| Protein sequence | MTDRKIEFKK LTQDEVDAIC ARHERLWSGR SGGARANFSY TILENMVLAN RDLSDADFSG
AVLRGAVLSG ATLNSAVFFA ADLRRANLEG ASLRRADLRG AIMRGANLTG ADLTEADMRE
GAIAQMDKEK GLAVLTHKTQ ENDAGTANFT GANLSHSKMA GIAAQKADFT DAMLLGTRLI
RANLRGSSFQ GANLEGADMS GADLSDTDFT HAVLIGTKTV MAKTQGMNTD GALTNAAVGI
DPEALEQPVA DQIAEHVRWC ETNGKEGKPS LFDGTDLRGL TSLAGKTLTA FHARGATLYG
LDLEGAQLQG ARLEKADLRM VSLRGADLRG ADLTGANLSN ADLRDCQLGP LLLDGNRVLP
ASLAGVRARY TDLRGADLRQ LKATGADFSY ATLNGTNVKR ASFNGSCFTG ARIDEDFSTQ
VDSLDGAVDL DAA
|
|---|
| |