Gene Mmar10_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2456 
Symbol 
ID4285438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2672050 
End bp2673111 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content57% 
IMG OID638141960 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_757686 
Protein GI114571006 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAATTC TTGTTACAGG TGGCGCCGGA TTTATCGGTT CTGCGGTTGT TCGGCGCGCC 
ATTACGCAGC GCGGTTACAC GATCGCGAAT CTGGATGCCC TGACCTACGC AGCTAACCAG
GCCAATCTCG ATTCAATCGC AGACAACCCG GATTATAGTT TCCACCGGGC CGACATCCGC
GATCTGGACG CGCTCGTGAA GGTGTTTGCC GAAACCGATC CCGATGCGGT AATGCACCTC
GCTGCGGAAT CCCATGTTGA TCGCTCGATC GAAGGACCGA TCGCCTTCGT GGAAACCAAT
GTGATGGGCA CCGCGAACAT GCTGCAGGCT GCGCGTACCC ACTGGGAAGG CCTGTCCGAC
GCACGCCGAG ACGCCTTCCG TTTCCACCAT ATCTCGACCG ATGAAGTCTA TGGCGCTCTT
GGTCCGTCCG GTTTCTTCAC CGAAACCACG CGCTATGCGC CCAATTCGCC TTACGCATCC
AGCAAAGCGT CTTCGGACAT GTTGGTGCGC GCCTGGGGCA AGACTTTCAA GCTTCCGGTT
GTGATCTCCA ATTGCTCGAA TAATTACGGC CCCTTCCAAT TCCCGGAAAA ATTGATTCCG
GTCGTCATCC TCAAGGCCTT GGCCGGTGAG GCCATACCGG TCTATGGTGA TGGCTCAAAC
GTGCGCGATT GGCTGTACGT TGATGATCAC GCCGAAGCTC TGCTCACCAT TTTGGAGCGA
GGCAAATTGG GCGAGATCTA CAATGTCGGC GGCGATGCTG AAGTCTCCAA CCTCGATCTG
GTCAAGCAGA TCTGCGCCAT CATCGACAAG GAGCTTGATC GCAGCACGCC AAGCGACAGC
CTGATCAAAT TCGTCACTGA CCGGCCAGGT CATGATTTTC GCTATGCCAT CGATTCGGCC
AAAATCAAGT CGGAGCTTGG CTGGACCCCG TCGGTGACCG TGGAAGAAGG CATCGCCGAG
ACCGTACGGT GGTATCTTGA GAACCGCGAG TGGTGGCAGG CGATCCAGGC GCGCGGCCAC
AAACAGGATC GGATCGGGTT GGCCGTGGGT GTGAAGGCGT GA
 
Protein sequence
MKILVTGGAG FIGSAVVRRA ITQRGYTIAN LDALTYAANQ ANLDSIADNP DYSFHRADIR 
DLDALVKVFA ETDPDAVMHL AAESHVDRSI EGPIAFVETN VMGTANMLQA ARTHWEGLSD
ARRDAFRFHH ISTDEVYGAL GPSGFFTETT RYAPNSPYAS SKASSDMLVR AWGKTFKLPV
VISNCSNNYG PFQFPEKLIP VVILKALAGE AIPVYGDGSN VRDWLYVDDH AEALLTILER
GKLGEIYNVG GDAEVSNLDL VKQICAIIDK ELDRSTPSDS LIKFVTDRPG HDFRYAIDSA
KIKSELGWTP SVTVEEGIAE TVRWYLENRE WWQAIQARGH KQDRIGLAVG VKA