Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_2412 |
Symbol | |
ID | 4285602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 2623670 |
End bp | 2625556 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638141916 |
Product | membrane protease FtsH catalytic subunit |
Protein accession | YP_757642 |
Protein GI | 114570962 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.278023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTATGA GAAATATTGC GATCTGGGCC GTGGTCCTCG TCCTGGTGAT GGTCCTGGTT CAGATGGTCG GCCGCTCGGC TGATCCGGCG ACGACCCAGC GTGGGCCGTC CTACTCGGAT TTTCTGGACC GGGTGGAGCG CAATGAAATC GAAAGCGCGA CCATTCAGGG CGATACACTT TTCGCCGTGA CCGCGTCTGG CGAGCGTTTC GAAGTGGTAC TGCCGCCGTC CGATACCGAG ACTGTCGGCA TCCTGCGCGA AGCCGATGTG AATATCCGCG TCGAGGAACC GTCGGAAGAG GGCAATATCT TCCTGTCCAT GCTGTTCAAC TGGTTCCCGC TTCTGCTGCT GATCGGTGTC TGGATCTTCT TCATGCGCCA GATGCAGGGC GGTGGACGCG GCGGGGCGAT GGGTTTCGGC AAGTCCAAGG CCCGTCTGCT GACCGAGCAT CATGGCCGCA AGACTTTTGA CGATGTTGCC GGTGTCGATG AAGCCAAGGA AGAACTGCAG GAAGTCGTCG AGTTTCTGAA AGACCCGTCA AAGTTCCAGC GTCTAGGCGG CAAGATCCCC AAGGGCGCCC TGCTGGTCGG TCCTCCGGGT ACCGGTAAGA CCCTGCTCGC CCGTGCGGTG GCCGGCGAAG CCAATGTGCC CTTCTTCTCG ATCTCCGGTT CTGATTTTGT CGAGATGTTT GTCGGCGTCG GCGCCAGCCG TGTCCGCGAC ATGTTCGAGC AGGCCAAGAA GAACGCGCCC TGCATTATCT TCATCGACGA AATCGATGCT GTCGGTCGTT CGCGCGGCGC CGGTATCGGT GGCGGCAATG ACGAGCGCGA ACAGACGCTC AACCAGCTCC TCGTCGAGAT GGACGGTTTC GAGACCAATG AAGGCATCAT CCTGATCGCC GCGACCAACC GTCCCGATGT GCTCGACCCG GCCCTGCGCC GTCCGGGCCG TTTCGACCGC GAAGTCGTGG TCGGCAATCC GGATATTCTG GGCCGTGAGA AAATCCTCAA GGTCCACATG CGCGAAGTTC CGCTGAGCGA GGATGTCGAC GTCAAGATCA TCGCACGTGG CACGCCCGGT TTCTCTGGCG CCGACCTGGC CAATCTGGTC AATGAGGCCG CCCTGCTCGC CGCCCGTCGC AACAAGCGCC GCGTTGCCAT GCAGGAATTC GAGGATGCCA AGGACAAGGT GATGATGGGG CCGGAGCGTC GGTCCATGGT CATGACCGAT GCCGAAAAGA AGCTGACGGC TTATCACGAA GCCGGCCACG CGATTGTCGG CCTGAACATG CCGCAGCATG ACCCGCTGCA CAAAGTCACC ATCATTCCGC GTGGACGCGC CCTCGGCGTG ACGTTCAACC TGCCCGAGGC TGACCGCCTC AGCTATTCGC GCCAGTATTG CGTGTCGCGA CTGGCTTCCC TGTTTGGTGG CCGCGAAGCC GAGATCATCG CGCTGGGTCC GGAGAATGTG ACCAATGGTG CGACCAGTGA CATCCAGCAG GCCACCGGCA TGGCACGCGC CATGGTGATG GAATGGGGCA TGTCCGAGAC GCTGGGCCGG GTGCGCTATG AAAACCGCTC CTACGAAGCG CCGGCGATCT CACCGGACAC GTCCGAGCTG ATCGACAAGG AAGTTCGCTC CCTGATCGAA GATGCCGAGA CCACGGCGCG CCGCATCCTG ACCGAGCGCC GGGCCGATCT CGATACGCTG GCTGAAGGCC TGCTGGAATT CGAGATCCTG TCCGGTCAGG AGGTCAAGGA CCTGCTGAAC GGCAAGCGGC CGGAACGTCC GGACGAGACC ACGCCGCCGC CGAGCGACAC GCCGAGCAGC GCCGTGCCCA GCACGGACGA GGAACCGGAC ACCGGTCCGG AACCGCAAGG CGCCTGA
|
Protein sequence | MPMRNIAIWA VVLVLVMVLV QMVGRSADPA TTQRGPSYSD FLDRVERNEI ESATIQGDTL FAVTASGERF EVVLPPSDTE TVGILREADV NIRVEEPSEE GNIFLSMLFN WFPLLLLIGV WIFFMRQMQG GGRGGAMGFG KSKARLLTEH HGRKTFDDVA GVDEAKEELQ EVVEFLKDPS KFQRLGGKIP KGALLVGPPG TGKTLLARAV AGEANVPFFS ISGSDFVEMF VGVGASRVRD MFEQAKKNAP CIIFIDEIDA VGRSRGAGIG GGNDEREQTL NQLLVEMDGF ETNEGIILIA ATNRPDVLDP ALRRPGRFDR EVVVGNPDIL GREKILKVHM REVPLSEDVD VKIIARGTPG FSGADLANLV NEAALLAARR NKRRVAMQEF EDAKDKVMMG PERRSMVMTD AEKKLTAYHE AGHAIVGLNM PQHDPLHKVT IIPRGRALGV TFNLPEADRL SYSRQYCVSR LASLFGGREA EIIALGPENV TNGATSDIQQ ATGMARAMVM EWGMSETLGR VRYENRSYEA PAISPDTSEL IDKEVRSLIE DAETTARRIL TERRADLDTL AEGLLEFEIL SGQEVKDLLN GKRPERPDET TPPPSDTPSS AVPSTDEEPD TGPEPQGA
|
| |