Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_2334 |
Symbol | |
ID | 4285354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 2543590 |
End bp | 2544162 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638141837 |
Product | lipoprotein signal peptidase |
Protein accession | YP_757564 |
Protein GI | 114570884 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000924043 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGCTA TGGCCAATTT CTTTGTGCGT GTTGATCGGT ACTTAGCGAA GCAAGCTGCT TTGAGCAGTA GGTTTTCGAA GATATCTCGA GCGGTGAGCA TCGCGCAACT AACGGCGATA TCGGTCTTGG TCGGTATGGA GTTGATCACA AAACAGGTGC TTGAAAGTAA GCTGGCCGTT TGGGAGGGCG CGACTTCCAT ATTCCCCGGG TTTAGGCTTA CGCTGAACCA CAATCGAGGC GTAAGCTTCG GGATGCTCGA TAACGGACAC TGGCTGATGC CCTATCTGCT TGCAATCGTG GCTTTGATCT TGGTCGTAGC GGTCTTGATC TGGACTGCGC AGCAGAAATC GAAGTGCATT AATGTCGCCG GCATTCTGGT TGCCGCGGGC GGATTGGCAA ACGCGATCGA TAGGCTTGGC GATGGAGCCG TCACAGACTA TTTGGATTTT GGATGGCAAG CGCTCCGCTG GCCCACATTC AATTTGGCCG ACGTTCTTAT CTTCATCGGC GTCGCGCTGT TACTGATCGC ATGGAGGAAA GGGTCTCAGA ATTTGGAAGG CGGCGAGCAG TAG
|
Protein sequence | MNAMANFFVR VDRYLAKQAA LSSRFSKISR AVSIAQLTAI SVLVGMELIT KQVLESKLAV WEGATSIFPG FRLTLNHNRG VSFGMLDNGH WLMPYLLAIV ALILVVAVLI WTAQQKSKCI NVAGILVAAG GLANAIDRLG DGAVTDYLDF GWQALRWPTF NLADVLIFIG VALLLIAWRK GSQNLEGGEQ
|
| |