| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2319 |
|---|
| Symbol | |
|---|
| ID | 4285339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 2529098 |
|---|
| End bp | 2532205 |
|---|
| Gene Length | 3108 bp |
|---|
| Protein Length | 1035 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 638141822 |
|---|
| Product | CzcA family heavy metal efflux protein |
|---|
| Protein accession | YP_757549 |
|---|
| Protein GI | 114570869 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3696] Putative silver efflux pump |
|---|
| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACT TAATGCACCG CCTTGCCGGC GGCCGGCTGC TAGCCGCCAT CGCGGCCCTA
ACCCTCACCG TAGGGGGGCT GTTTGCCTTT CGTGCGCTTC CAGTTGATGC GTTTCCCGAT
CCTTCACCCT CGCTGGTTCA GGTGTTCACC GAAACCGAAG GGCTCTCTCC AGAAGAAGTC
GAACGCTATG TAACCTTCCC AGTCGAAACC GCGATGTCCG GTCTTCCAGA TGTCGAGGAA
ATCCGATCGG TCTCAAATTT CGGTCTCTCC ATTGTAAACA TCTATTTCGA GGATGGCACG
GATGTGTACT TCGCACGCCA GGTCGTAGGC GAGCGATTAC CAGAGGCCAG CGAAGCCATC
CCAGATGGTT TCGGGACGCC CCAGCTCGGG CCCATTTCGA GCGGACTAGG CATCATCATG
TACTTTCGCG TCGTCGATGA GACTGGCGCC TATGATCTGA CCGAACTCCG CGAAATCACC
GACTGGATGA TTAAGTACCC TCTTCAATCC GTCGAAGGCG TGACCGAAGT GCTAGCGCTT
GGCGGTTTCG AAAAGCAATA CCAAGTTCGT CTCAATCCCG ATCTTCTGAT CGCCTATGAT
TTAGAGGTGG CAGATGTAAT CGGTGCTCTA GAAAGCGCAA ATCGCACGAC CGGTGCGCAA
TTCATCGAAG TAGGCGCGGA ACAATACACC GTGCGTGGTG TCGGCTTGGC ACGATCGGTT
TCCGACCTCG CAGAAACGCC GGTTAGCACG GTCAACGGTC GTTCGATCAG AGTGAGCGAT
CTTGGAGAGG TCGTTATTGG CGGTGGTACG CGCCAAGGGC TCGCGACTGC CAACGGCAAT
GGCGAGACGG TCGCCGGCCT CGTTCTTAAA CTCTATGGTA CGAACACGTC TGATGTGATT
GAGCGCACAC ACGCGCGCTT CGATGAGATC AATGCATCCC TGCCAGAAGG CGTACGCGCC
GTTCCATATT ACGATCAGGG TACACTGGTT AGACGGGCGG CCTCGACCGT CACGACCGCG
CTCTGGCAAG GTGCTCTACT GGTCGCAGTT GTCGTGTTTA TCTTCCTCGG TGGCTGGCGA
CCTAGCCTAG TGGTGGTCTT GTCAATTCCA TTCTCGGTTG GCTTCGCCTT CATCTCGATG
AGCGTGTTGG GCATTAGCGC AAATTTAATG TCTTTGGGAG GTGTCGCCAT CGCCATCGGT
ATGATGGTTG ATGGCGCTAT CGTCATTGCC GAAAATGTCG ACCGAGGTTT CCGGGAACGG
CGGAATGGCG AGGACGCTCG CGATGTGGTC GCCAAATCGA CCGCGGAAGT TATCGCTCCG
CTAATCGCAG CCGTCGCAGT CGTGATTATT GTGTTTCTGC CTCTATTTTC GCTGGAAGGT
GTTGAGGGTA AGACTTTCCG GCCGCTTGCT GCGTCTGCCG CCCTTGCCAT GACAGGATCG
CTCCTCTACG CCGCGCTAGT CGCGCCCGCC ATGGCCTTTG GCTTAATCAA GCCACCCAAA
CACAATACGT CTGGCGAGGG CGCAATCGCC GGCGTGGTCA AGTCTGTCGC AAGCGTGTTC
GTCCGCGCAC GCCTTGCTGC GGTTGCGTTA GCGCTTGGAC TTTTGGTCAT CGGAGGGTTG
GCGGGCTCAA GATTGGGCTC GGAGTTCACA CCCGCTCTCG AAGAAGGTGA TATCTTACTT
CGGGTCTCTA TGGCTCCATC AATATCGCTC ACCGAGGGGC GCGAGACATC AACACGACTT
GAACGTCGAT TGCTGGCGGC GTTCCCTGAG ATTGACTCCA TTGTTAGTCG AATTGGCCGA
GGCGAGGTCG GGGCTCACGC TGACCCGGTA AACAGTATTG AGGCCTTTGT CGCTTTGAAG
CCAAGGTCAG AGTGGCGACC CGGCCTCACA CCGACCGACC TGCGTGCAGA AATATCCGAA
GATCTGGAGT CCTTTCCGGG AATCAGAGTG AACATCGGGC AACCGATCGC GATGTCGGTT
GATGAACTTC TAACCGGCAC GAAAGCTCAG CTCGCGGTAA AAATTTTCGG TCCTGACATG
GATGTGCTGT TGGAAGGTTC GCAGGAACTA CAATCAATTC TTCAACGTGT CAGCGGGGCG
AGTGATGTGC AGGCTGATCA GATCACCGGC GCGCCACAGT TAGTCGTCTC GGTCGATCGC
GCGGCCTTAG GCCGATATGG TCTTTCAGTG GAGGAAGCCC TTGATACGCT GAGCGCGTCC
GTCGGCGGGG CGGAAGCCGG CGTCCTCTTT GAAGGGGTTC GCCAGTTTCC AGTGGTCGTC
AGATTTGACG AAAACCGGCG TGACAATGCG CAGGCGATTG GCCGACTTAT CCTAGAAAGC
GAGAGTGGTG CTCGGGTGCC GCTTTCAAGT GTCGCCTCGA TAAGAACTGT TGTCGGTCCT
CGTCAGATAA CGCGCGAAAA TGGGGAGCGT TTCATAACGG TGCAGCTCAA TGTTCGCGGG
CGCGATATCG GCTCCTTTGT TGCCGATGCG CAAGCGGCGA CCTCCAGTCA GCTAGACCTT
CCGCCTGGTT ATCGTGTCGA ATGGGGTGGC CAGTTTGAAC TGCAACAACA GGCCAATGCC
CGCTTCGCCG TGGTGATACC GATTACGTTG GGAATAGTTC TTCTCATCCT GTTACTCGCA
TTTGGGAGGC TCAAGTCAGC GATATTGATC CTGCTGAACA TTCCTCTCGC GTTGACCGGT
GGCGCCCTCG CTTTGTGGCT AACAGGATTA CCAGTCTCGG TGCCAGCCAC GGTCGGGTTT
ATTGCGCTTT TCGGTATCGC CCTTGGTAAC GGAATGGTGC TCGTCAGCTT TATGGACGAC
TTCGCGCGGC AAGGCCGCGA CCACAATGCG CTCGCTATTG AAGCGGCAGG ACTGAGAGCA
AGGCCGGTGC TGATGACAGC GCTCACGACA GCGCTTGGTT TGGCGCCATT GCTATTTGCG
ACTGGAGTAG GTGCTGAAGT GCAGCGCCCG CTAGCGACCG TTGTGATGGG CGGACTCGTT
TCGTCAACCG TCCTTACCTT GCTCGTACTG CCAGCGCTAC ATCGGTGGTT CGCACCAAAA
CCGGGCGGGC ATGTTTCGGT ATTGGAGACA GAGCACGCTC GTGACTGA
|
|---|
| Protein sequence | MQNLMHRLAG GRLLAAIAAL TLTVGGLFAF RALPVDAFPD PSPSLVQVFT ETEGLSPEEV
ERYVTFPVET AMSGLPDVEE IRSVSNFGLS IVNIYFEDGT DVYFARQVVG ERLPEASEAI
PDGFGTPQLG PISSGLGIIM YFRVVDETGA YDLTELREIT DWMIKYPLQS VEGVTEVLAL
GGFEKQYQVR LNPDLLIAYD LEVADVIGAL ESANRTTGAQ FIEVGAEQYT VRGVGLARSV
SDLAETPVST VNGRSIRVSD LGEVVIGGGT RQGLATANGN GETVAGLVLK LYGTNTSDVI
ERTHARFDEI NASLPEGVRA VPYYDQGTLV RRAASTVTTA LWQGALLVAV VVFIFLGGWR
PSLVVVLSIP FSVGFAFISM SVLGISANLM SLGGVAIAIG MMVDGAIVIA ENVDRGFRER
RNGEDARDVV AKSTAEVIAP LIAAVAVVII VFLPLFSLEG VEGKTFRPLA ASAALAMTGS
LLYAALVAPA MAFGLIKPPK HNTSGEGAIA GVVKSVASVF VRARLAAVAL ALGLLVIGGL
AGSRLGSEFT PALEEGDILL RVSMAPSISL TEGRETSTRL ERRLLAAFPE IDSIVSRIGR
GEVGAHADPV NSIEAFVALK PRSEWRPGLT PTDLRAEISE DLESFPGIRV NIGQPIAMSV
DELLTGTKAQ LAVKIFGPDM DVLLEGSQEL QSILQRVSGA SDVQADQITG APQLVVSVDR
AALGRYGLSV EEALDTLSAS VGGAEAGVLF EGVRQFPVVV RFDENRRDNA QAIGRLILES
ESGARVPLSS VASIRTVVGP RQITRENGER FITVQLNVRG RDIGSFVADA QAATSSQLDL
PPGYRVEWGG QFELQQQANA RFAVVIPITL GIVLLILLLA FGRLKSAILI LLNIPLALTG
GALALWLTGL PVSVPATVGF IALFGIALGN GMVLVSFMDD FARQGRDHNA LAIEAAGLRA
RPVLMTALTT ALGLAPLLFA TGVGAEVQRP LATVVMGGLV SSTVLTLLVL PALHRWFAPK
PGGHVSVLET EHARD
|
|---|
| |