| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2309 |
|---|
| Symbol | |
|---|
| ID | 4285734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 2516885 |
|---|
| End bp | 2518681 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638141812 |
|---|
| Product | long-chain-acyl-CoA synthetase |
|---|
| Protein accession | YP_757539 |
|---|
| Protein GI | 114570859 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATGC TGGGCGCCAT CGCGCGCGAG TTCAACTATG TGACGAGCAT GCTCTCGGTG
CTGAAGAAGA TCGGCAAGGT CGGCCCCGGT TCGGGCCTGC GCGTGCCCGA TCATATCGAG
GCCACTGTCG ACCGCTTCCC CGACCGCCCG ATGGCCATCC TCGATGAGGG CGAAATCAGC
TATCGGCAGT TTGATGCTTT CGCCAACAGG GTCGCCAACT GGGCGCTGGA GCAGGGTTTG
AAGCCCGGCG ACACAGTCGC GCTCTTCATG ACCAATCGCT GGGAATATAT CGCCGTCTGG
TTCGGCCTGT CGAAGGTTGG GATCGTCACC TCGCTGATCA ACAGCCAGTT GTCCGGGCAT
TCGCTGGCCC ATTGCCTGAC CATTGGTGAG ACGCGTCATG CGATCGTTGA AGGAGCGCTG
TCGGAGGCCT ATGACGCGGC GCGGTCCTGT GATCTCGGCG ACATCCGGGC CTGGTCCTTC
GATGGCGGGT TTTCCGACGC GGAAGGGCTC GACGACGTTC TCGCCGGGAT GAGCGATAGC
CGGCCCGAGC GGGCGCTGCG CGAGGCTGTC GTGCCAGGTG ATCCGGTGCT GAAAATGTTC
ACCAGCGGAA CGACCGGCCT GCCCAAGGCT GCGCTGATGA CGCATGTCCG GGCGCTCTAT
TACCTCAACA TTTTCGCGCT CATCGCCAAA GCCGCGCCGG AAGACCGGAT GATGATGGTG
CTGCCGCTCT ATCATGCAAC CGGCGGCCTG TGTGGCGTCG GCTGTGCCCT GTCATTCGGT
GGCGCGCTGG TGATCCGGCC ACGCTTCTCC GCCTCGGCCT TCTGGCCTGA CGTGCAGCGC
TTCAAGGCGA CCCTGTTCAT GTATGTCGGG GAGCTGTGCC GCTTCCTGGT CAATTCCGAC
CCGGTTCCCG AAGAGGCCGG GCACACGCTG CGCTGCGCCA TCGGCAATGG CATGCGCCGC
GATGTCTGGG ATGCCTTCCA GGCTCGCTTC GACGTGCCGG ACATTGTCGA GTTCTATGGT
TCCACCGAAG GCAATGTCGG CCTGGTGAAC GCCTACAACC AGCCCGGTGC CGTGGGCCGT
GTCCCGGGCT ATCTCAAAAG CCGCTTCAAT ATCGATCTGG TGAAGTTCGA TCTCGATAGC
GAGATGCCGC TGCGCACCAC TGAGGGACGT TGCGTGCCGT GCGAGCCGGG CGAAGTTGGC
GAGGCGATCG GCCGGATTGA CCCGTCCGAT GCCCGTTTCC GCTTTGACGG TTATGGCTCG
CAGGAAGACA CCGAAAAGAA GGTGTTGCGC GATGTCTATG AGCCGGGTGA TGCCTGGTTC
CGGACCGGCG ATCTGATGTC ACGCGACAAG CTGGGCTATT ATTATTTCGT CGACCGGGTC
GGCGACACCT TCCGCTGGAA GTCCGAGAAT GTCGCCACCG GCGAGGTCGC CGAAGCCTTC
TCCTTCAAGG GGATCGAACA GGCCAATGTC TATGGTGTCG AGGTGGCGGG GCATTCCGGT
CGTGCCGGAA TGGCGGCCCT GGTCACGGAA GGGGCCAAGG CACTCGATCT CGACGCCCTG
CATGCCCATG TCCACGACTC GCTGCCAGCC TTTGCCCGTC CGCTCTTCCT GCGTCTCCAG
CAGCAGACCG ACACCACCGG CACGTTCAAA TTCCGCAAGG TCGACCTGGT CAAGGATGGG
TTTGATCCGG CCAGGGTCGA CGACACGATC CTGCTCGATC ATCCGGGTGA GGGTCGCTAT
GTGCCGATGA CACCGCAGCT GTACGAGGCG ATACAGTCAG GTAGCCTGCG GGTATGA
|
|---|
| Protein sequence | MGMLGAIARE FNYVTSMLSV LKKIGKVGPG SGLRVPDHIE ATVDRFPDRP MAILDEGEIS
YRQFDAFANR VANWALEQGL KPGDTVALFM TNRWEYIAVW FGLSKVGIVT SLINSQLSGH
SLAHCLTIGE TRHAIVEGAL SEAYDAARSC DLGDIRAWSF DGGFSDAEGL DDVLAGMSDS
RPERALREAV VPGDPVLKMF TSGTTGLPKA ALMTHVRALY YLNIFALIAK AAPEDRMMMV
LPLYHATGGL CGVGCALSFG GALVIRPRFS ASAFWPDVQR FKATLFMYVG ELCRFLVNSD
PVPEEAGHTL RCAIGNGMRR DVWDAFQARF DVPDIVEFYG STEGNVGLVN AYNQPGAVGR
VPGYLKSRFN IDLVKFDLDS EMPLRTTEGR CVPCEPGEVG EAIGRIDPSD ARFRFDGYGS
QEDTEKKVLR DVYEPGDAWF RTGDLMSRDK LGYYYFVDRV GDTFRWKSEN VATGEVAEAF
SFKGIEQANV YGVEVAGHSG RAGMAALVTE GAKALDLDAL HAHVHDSLPA FARPLFLRLQ
QQTDTTGTFK FRKVDLVKDG FDPARVDDTI LLDHPGEGRY VPMTPQLYEA IQSGSLRV
|
|---|
| |