| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2301 |
|---|
| Symbol | |
|---|
| ID | 4285726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 2505547 |
|---|
| End bp | 2507967 |
|---|
| Gene Length | 2421 bp |
|---|
| Protein Length | 806 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638141803 |
|---|
| Product | diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_757531 |
|---|
| Protein GI | 114570851 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC CGACGGCCGC CCTTTCCCTG GCCGAGCGTG CGGAAGTCTT GGCCGGTCAG
CTCATAAATA ATGAACGTGA TGAAGCATTG GCAACGGCCG AATGGCTGCA GTCTGAAGCG
TTGACCCGCA TGGGGCGCGC CGAGGATGCC CATCCGCACG CCCTTGAGGC GCTGGCCCGT
TTGGGCGCGG CACCGGCCGA GACAAAACTG CTGGCTGACA TCTTCACCTC GCTCGGGCGG
ATCGAGAAAG TGCTGGGCGA ACATGGCGAG GCGCTGGAGC ATTATCAGCG TGCCTACGAG
ATATACCGCG ATCTGGACGA GCGTCGCAGC GAGTCGATTG CCCTCCAATC CATGGCCTCA
ATCTATTCTG ACGCCCAGCA GTTCGAGCGG GCGGTAGAGT ATTTCAGGAG TGCACTCGAG
CGCTTTCAGG ATCCGTCTCT GGATCTTGCC GCCCACAATA ATCTCGCGAA CGCACTGACC
CAGATCGGGC GTTATGATGA GGCTGCGGCC TCGTTCGAGC AGGCGCGGAC CCTCGCGCAG
TCGATGGGCA GCGCCATCCT CGAGGCCCGC GTGCTCAACA ATCTTGCCAA TATGCAGCTT
GAGCAGGCCG ATCATGACGC CGCCGAAATC TCGATCGATG CGGCCTTCGC CCTGGTCGAG
GATGATGGTA CGTTCGAATG GCTTCGCTTC TTCTGGGGCG TGCGGGCCCA GATCGCTTAC
GGCCGCGGGG AAACCCGTCG CGCGGTCAAC TTCCTCAGTG TTGCCTTCCA TGATGTCGAG
GTCGAAACCA CATCCCAGAA CTATATGGAG TTGCATGGCC GTGCCGCCGA GATCTATGCG
GAACACGGCG ATTGGGTTTC GGCCTATGCC CATTTGCGGG CGTTCAAGCG TCTGACGGAT
GAGCGCGCGG CTTTCGCGAC GTCCGCCAAC AGCGCTCTCG TTGGCGCCCA GTTCGATTTC
ACCGAACAGG AACTCGAGAT CCAGCAATTG CGATCGGCCG GCCTCGAGCA GGCGCTCGCC
CTGGCCCGGG CCCGGCAGAG CCGGAACCTG ATGATCGCCT TCGGCATCGG AGCCGCGTGT
CTGTGCCTGG CCGGCTTCGT GTATGCGAGA AGCCGGGTGG CGCGCGCCAA GGCACAGGCC
CTGTCCGAAG TCCTCTACAC GGATGCCAGT ACCGGACTGC CCACCCATGC CGCCATGCTC
CGCGACCTGG CTGAGATCAC TGCCAAAACC GGTGCGGCGC CGGCCGTCAT CGCGGTTCAG
ATCAAGCGCC GCAAGCATTT GTCCGGTGCC CTTGGCTATC ACATCTATGC CCGCTTCGAG
GCCGCCATCG CCGCGCGCCT TGCCGGTGGA AATTATCCGG TGACAGTGTA CCGGCTCCTG
CCCGGACTGT TCGGACTCCT GCAGCCATCC GAAGATACGC GCGACGCAAG TGTCGTGGCT
CGCGATGTGA CCGGATTGTT CGACACGCCG GTCCAGGTTG ACGATCTCAA TATAGACGTC
GGCATCATCT GTGGCCTGGC GCAGGGCGAG GATGCGGAGA CCGCCATTCG TCAGGCCCAT
CTGGCGATTG ATCAGGCGCG CCGTCTCAAT CTGACCCAAG CCGTGTTCGA CAAGGACATG
TACGGCAATC CCGCTGCGAA CCTGTCATTG ATGAGCGAAA TGATGCGGGC GACGGAAAAG
GGTGAGATGT CGCTCTATTA CCAGCCAAAG CTGAAAGTTC GCACCGGGCG GTATGAATCC
GTGGAAGCGC TCAGCCGCTG GTTCCATCCC GATCGAGGCT TCATTTCGCC GGATCAATTC
ATTCCACAAG CCGAGGAAAC CGGGCATATC CGGCCCTTCA CCGAGTGGGT TATCCGGCAA
AGCATCGAGG ATCAGAAACG TCTGCTTGCC GAAGGCAAGC CGATTGCCGT CGCCATCAAT
ATCTCCGGCG CCCTGGTCGG CGATCCGGAA TTCGCGCGCA AAGCCCGTTC CATGATTGTC
GGTGCCAGCG GACCGATCAC GCTCGAAATC ACCGAGACAG CCGTGATGAC CAATCCGGAG
AAGGCGATCG AGCACCTCAA TGCGTGGCGT GAATCCGGTG CCCGGATCTC CATCGATGAT
TATGGTACCG GCCAGTCCTC ATTGGCTTAT CTGCAGATGA TCCCCAGCGA TGAGCTGAAG
CTGGACCGCC AGTTCGTGTC CAACCTGAAT GCCAATGCGC GCGGCCGCAT GCTGATAAAG
TCGACCATCG ACCTGGCGCA CAATCTTGGT TTGGAGGTTG TGGCTGAGGG GGTCGAGACA
GAGACGGATC TCGCCGCGCT GAAGCTCCTC GGCAGCGACT GGATCCAAGG TTATCACCTG
TCCAGACCCT TGCCGATTTC CGAGCTGGCC GAGTTTCTGG CTGTGCCGGA AGAGACGATG
CTGAGGTCTC AATCCTCCTG A
|
|---|
| Protein sequence | MADPTAALSL AERAEVLAGQ LINNERDEAL ATAEWLQSEA LTRMGRAEDA HPHALEALAR
LGAAPAETKL LADIFTSLGR IEKVLGEHGE ALEHYQRAYE IYRDLDERRS ESIALQSMAS
IYSDAQQFER AVEYFRSALE RFQDPSLDLA AHNNLANALT QIGRYDEAAA SFEQARTLAQ
SMGSAILEAR VLNNLANMQL EQADHDAAEI SIDAAFALVE DDGTFEWLRF FWGVRAQIAY
GRGETRRAVN FLSVAFHDVE VETTSQNYME LHGRAAEIYA EHGDWVSAYA HLRAFKRLTD
ERAAFATSAN SALVGAQFDF TEQELEIQQL RSAGLEQALA LARARQSRNL MIAFGIGAAC
LCLAGFVYAR SRVARAKAQA LSEVLYTDAS TGLPTHAAML RDLAEITAKT GAAPAVIAVQ
IKRRKHLSGA LGYHIYARFE AAIAARLAGG NYPVTVYRLL PGLFGLLQPS EDTRDASVVA
RDVTGLFDTP VQVDDLNIDV GIICGLAQGE DAETAIRQAH LAIDQARRLN LTQAVFDKDM
YGNPAANLSL MSEMMRATEK GEMSLYYQPK LKVRTGRYES VEALSRWFHP DRGFISPDQF
IPQAEETGHI RPFTEWVIRQ SIEDQKRLLA EGKPIAVAIN ISGALVGDPE FARKARSMIV
GASGPITLEI TETAVMTNPE KAIEHLNAWR ESGARISIDD YGTGQSSLAY LQMIPSDELK
LDRQFVSNLN ANARGRMLIK STIDLAHNLG LEVVAEGVET ETDLAALKLL GSDWIQGYHL
SRPLPISELA EFLAVPEETM LRSQSS
|
|---|
| |