Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_2273 |
Symbol | |
ID | 4286739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 2478022 |
End bp | 2478561 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638141775 |
Product | shikimate kinase |
Protein accession | YP_757503 |
Protein GI | 114570823 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.787718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTACG CCTTCAAACC GCGGAAATCG CTCGTCCTCA TCGGATTGAT GGGAGTTGGC AAGACCACTG TCGGTCGCCG CCTGGCGCAT GCCCTGAAAC TGCAGTTTCG CGATGCCGAC GAGGAAGTCG AGAAGGCCGC CGGACGCAGC GTGTCGGAGA TATTCGAAGA TTTCGGTGAG CACGCTTTCC GCGATGGAGA GCGCAAGGTC ATCGCCCGCC TGCTGGAGGA GCCGCCCATG GTACTGGCGC TTGGCGGCGG TGCCTTTGTT GACGACGAAA CCCGCGAACG GGTCAAGGCG ATGGCGACTT CGATCTGGCT GCAGGCTGAT GTCGAGACAC TGGTGCAGCG CGTCGCCCGC CGCGACACGC GCCCCCTGCT GCGCGACGAA GACCCGGAAA CCGTGCTGAG GACCTTGCTC AACAAGCGGC AAGCCGCGTA TGCAGAGGCC GATATCCATG TCGATGCGTC GGGCGGGTCA CACCAGATCA CGCTCGACAG CATATTGCAG GCACTGGAAG GCCGGGAGGC AAGGACGTGA
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Protein sequence | MSYAFKPRKS LVLIGLMGVG KTTVGRRLAH ALKLQFRDAD EEVEKAAGRS VSEIFEDFGE HAFRDGERKV IARLLEEPPM VLALGGGAFV DDETRERVKA MATSIWLQAD VETLVQRVAR RDTRPLLRDE DPETVLRTLL NKRQAAYAEA DIHVDASGGS HQITLDSILQ ALEGREART
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