| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2027 |
|---|
| Symbol | |
|---|
| ID | 4285481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 2208854 |
|---|
| End bp | 2209711 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638141528 |
|---|
| Product | thymidylate synthase |
|---|
| Protein accession | YP_757257 |
|---|
| Protein GI | 114570577 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR03284] thymidylate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.242999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTCA TCGACAATGA AAGCTTCGCG CAGGTGCGTG CCGGGGCGAA TGGTTCGGAT
GTCGAAAACG CCTATCTGGC GCTGCTTCGC GACATTCTCG AGAATGGGGC CGAACAGGCC
GACCGGACCG GCGTCGGGAC GATGTCGGTA TTTGGTCGCC AGCTGCGCTG TGACCTGTCC
AAGGGCTTCC CGCTTCTGAC CACCAAGAAG GTGCATTTCA AGTCGATCGC GATCGAGCTT
TTATGGTTCC TGCGCGGCGA GACCAATGTG CGCTGGCTGC AGGAGCGCGG CGTCAAGATT
TGGGACGAGT GGGCCGATGA AAACGGTGAT CTTGGTCCGG TCTATGGAAA GCAGTGGCGG
CGCTGGGAGG GTCCGGACGG CACCGAGATC GACCAGCTCT CGAACATCCT CGAGCAGATC
AGGAATAATC CGGCCTCGCG CCGGCTGATC GTGTCGGGCT GGAACCCGGC CGATGTGCCC
AATATGGCGC TGCCGCCCTG TCACACGCTG TACCAGTTCA ATGTTGCGGG CGGGAAACTG
AGCTGCCAGC TCTACCAGCG CTCGGCCGAC ATGTTCCTGG GCGTGCCCTT CAATATCGCC
TCCTACGCCT TGCTGACCGC GATGGTGGCG CAGGTGTGCG GGCTGGAGCC GGGCGAATAC
ATCCACACTT TCGGCGACGC CCATATCTAT TCCAACCATA TGGACCAGGT CCGCGAGCAG
CTCTCGCGCG CGCCGCGCGC CTTGCCGCAG CTGAAGCTCA ATCCGGATGC GACCGACCTG
TTCGGTTTCG AGTATGAGGA CATCGCGCTG GAGGGCTATG ACCCCCATCC GCGCATCACC
GCGCCGGTCG CCGTCTAG
|
|---|
| Protein sequence | MAVIDNESFA QVRAGANGSD VENAYLALLR DILENGAEQA DRTGVGTMSV FGRQLRCDLS
KGFPLLTTKK VHFKSIAIEL LWFLRGETNV RWLQERGVKI WDEWADENGD LGPVYGKQWR
RWEGPDGTEI DQLSNILEQI RNNPASRRLI VSGWNPADVP NMALPPCHTL YQFNVAGGKL
SCQLYQRSAD MFLGVPFNIA SYALLTAMVA QVCGLEPGEY IHTFGDAHIY SNHMDQVREQ
LSRAPRALPQ LKLNPDATDL FGFEYEDIAL EGYDPHPRIT APVAV
|
|---|
| |