Gene Mmar10_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2021 
Symbol 
ID4285475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2203302 
End bp2204228 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content67% 
IMG OID638141522 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_757251 
Protein GI114570571 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.257096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCCT GCCTGCTGAT TGCAGGCCCG ACGGCCGCCG GCAAGACCGC GCTCTCACTG 
GCGGCAGCGG AGCGCGTCGG TGGAGAGATC ATCAATGCCG ACTCGATGCA GGTCTATGCC
GGTCTGCCGC TGATCACCGC GCAGCCTGAC GCCGCCGAGC GCGCCCGGGC GCCGCACCAT
CTGTTTGGCA GTATTGATCC GGCCATCCGC TATTCGGTCG GCCAGTGGAC CAGCGATGTG
CTGGCCCTGA TTTCCGACAT TCGGGGTCGC GGGAATGTGC CCATCCTGGT TGGTGGAACG
GGGTTGTATT TCAATGCCCT GACGCGCGGT CTGGCACCGG TTCCCGAGAT CGGTGACGCG
GCCCGGGCCC GCGCGGCGGC CTTGCTCGAC GCCGACGGTC TGGCCGGCCT GCGCGCTGAA
GCCTTGCGCT TGGACCCGGT CGCGACCAAT CGCGTCGACG CGGCAGACCG CCAACGTCTG
TTACGGATCG TCGAAGTGGG TTTTGAAACC GGGACCGCCT TGAGTGTTTT CCAGGCCGAC
ACCGTGCCGC CGCTCGAACC TGCAGCGTGG CGCGGCATTG TCATCGAGCC CGATCGGGAG
GCCCTCTATC GCCGGATCGA TCAGCGCTTC GAGCACATGC TGGAGGCCGG CGCGCTTGAT
GAGGTGGCGG CTTTCATGCA GCGCGATCTC GATCCGGACC TGCCGGCCAG CAAGGCGCTC
GGCGTGCCGC CCCTGATCGC CCACCTGCGC GGTGAGATGT CGCTGGACGA GGCCAGGGAC
AACGCCAAGC GTGACAGCCG CCGCTATGCC AAGCGGCAGG GGACCTGGTT TCGCAATCAG
GCGGCCAGCT GGTCGCGTAT CGGAACGCTC GACAGCGAGG CGGCGATCAG CGCCCTGGCC
GATATCCTTG ATCAGCCGCC TGGTTAG
 
Protein sequence
MTPCLLIAGP TAAGKTALSL AAAERVGGEI INADSMQVYA GLPLITAQPD AAERARAPHH 
LFGSIDPAIR YSVGQWTSDV LALISDIRGR GNVPILVGGT GLYFNALTRG LAPVPEIGDA
ARARAAALLD ADGLAGLRAE ALRLDPVATN RVDAADRQRL LRIVEVGFET GTALSVFQAD
TVPPLEPAAW RGIVIEPDRE ALYRRIDQRF EHMLEAGALD EVAAFMQRDL DPDLPASKAL
GVPPLIAHLR GEMSLDEARD NAKRDSRRYA KRQGTWFRNQ AASWSRIGTL DSEAAISALA
DILDQPPG