Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1982 |
Symbol | |
ID | 4284690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 2163037 |
End bp | 2165466 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638141482 |
Product | TonB-dependent receptor, plug |
Protein accession | YP_757212 |
Protein GI | 114570532 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCCA ACACGTCAGC CAAGCGCCAC AGCTTGCGCT ATCTGCTCGC ATCGACTGTC GCCTGTATCG CTGCGGCGCC TGCCCTGGCG CAGAGCGACG AGACGCCGGA TGACGTTATT GTCGTCACAG CACAGCAGCG TGCCCAGTCG TCGCAGGATG TGCCGATCTC GTTGCAGGTC CTGGACAGCG AATTCATCGA CGCGGTCGCG GCTGACGATA TGGGTGACCT GGAAGCCTTC GTGCCGGGTC TCGATGTCTC CAACGGCAGC CCGACGCAGC CGCGCTATTC GATCCGCGGC ATCACCACCA GCGATTTCGG CGTCGGCACC GATCCGGCGG TCGGCATCTA TGTTGACGGG ATCTATGCAG CGCGCTCGGG CGCCTCGCTG CTGGCTTTCA ACGATATCGA GCGCATCGAG GTCCTGAAAG GACCGCAGGG CACCCTCTTC GGCCGCAACT CGGCTGCTGG CGCGGTCTCG ATCATCACCC GCGAACCCAG CGACGAGCTG GAAGGGCGTG TCGCCGTGCG CATCGGCAGC CATAACCGCA TGCGCACGGA GGCGATGCTC AACCTGCCGA TCACGGACAC GCTCGCCATT CGCGCCAACT TCCTGAGCAA CAAGGCTGAT GGCTGGCTGA CCGACGCGGT GACCGGTGAA GACTATCGCC GCGAGGACTC CTCCGCCGAC CGTTTCACCG TGCGCTGGAA TGCGACACCG TCGACCGAGA TCCTGCTTCG CCACAGCCGG GACACGATCG ACCAGGACGC GCGTCCGGCA ATCGGCATTG TCGAGATTCC CGCCTTCCCG GGCACGCCGC CGCTTCCCGT CGACACCACG GCATTCCTCG ACCCGTTCAA CGCACCTGTC CGCAATGATG TCGTGTTCAA CCGCGAAGCC CGCAATCTCG CCGAAACGAC ACTCACCGTC CGTCAGGACA TCGGCGACAT GACGCTGACC TCGCTGACCT CCTATCGCGA ATTCGACACG ATGAATCGCG AGGACGAGGA CGGCACCAAC CGGATCGACA CCTATTTCGA CACCAATAAT GTCGAGGACA ATGAAGCCTT CTATCAGGAA TTCCGCCTGG CCGGCACGAC CGGCACGGTC GATTGGCTGG TCGGCGCGAG TTATTACGAC GAGACCGCGA TCCAGGCGTC CGAAACCTTC ACCTTCACCG ATACCGTCAA CACGGTGCTC GGCAATGTCG GCGCCGGCAC GCCCTTCACC GATCTGGAAT ACGGCCTCCT GGTCCCGTTT GGCCTGCCGT TCAGCATGCT CGGTCACTCC TGGCAGGAGA CAATGAGCAA TCAGGGCGAG TTCACCGCCC GCGCGGTCTA TGCCGACATG ATCTGGTCAG CCACCGACCG CCTTAATGTG TCAGTCGGCC TGCGCTATAC CGAGGACGAA AAGAGCTTCC AGTGGATCAA TGGCGGTCGG CAGGCTGACA GTCTCGACCA GACGCTCGCC GCTCTCGACG GGGCCGGCAT CCTGGCGCTG GCCGGTGCCT CCCCGGCAGA CTTCCTGTTC GATTTCGTCT TTGACCTCGC CCCGCTCGCC GGCGTGGCCT GCGATAATGG CGTCAATGTT GCCGAAGGCG TCGCCTGCGT GATGGAAGAC AGTTGGAACA ATCTCAGCCC GCGCGTCGTC GTCGACTATC AGCTGACCGA CAATGTCATG ATCTATGGCT CGTTCAGTGA AGGCTACAAG GCCGGCGGCT ACAACTCGGT CGAGGTCGGT TCGCGCTTCG AGAACGAGAC CGTGACCAGC TGGGAATTCG GCTTCAAGTC AGACTTCCTG AACCCCGATC TCGTCTTCAA CATGTCGGCC TTCTCCTATG TCTACGAGGA CAAGCAGTCG ATCCGCCTCG TCGTTCCGAC CGGTGGCGGG GTGCCGCAAT ACCTGGTGCA GACCTCGGAT GACGAAGCCA TCGGTGTCGA TATCGAACTG GATTGGCAGG CGTCTGACGC ATTGCGCCTG CGCGGCAATG CCCAGTGGCT GGACTCCACC CACAAGCGCC GCGTTGACAG CAATGGCGCC GACCTGGCCG GTGAGCCGAC CGGCGAGCCG TACTGGAATG TCGCCTTCGG CGCCGACTAT GTCATTGATC TGGACGGCGG CAGCGATCTG ACCCTGCAGG CCAATCATGC ATATCGCGGC GAGAGCCGGT GCAACAGCCA GTCCGTCCTT CAGGGCACCT GTGGCGGCTA CACCGCCTTT GCCACCGGCG AAGCCCGCAA CCGCACCGAT CTGCGGGCCC GTTGGACGGC ACCGAACGGC GATCTGACCG TCAGCGCCTT CGTCAACAAC GTCTTCGACA ACCAGTATGT CGGCGGCGTC AACAACATCA CGGCGAGTAC GCTGGGTACA GCGTTCGCGT CCATCTCGGC GCCGCGGGTT TGGGGGTTGG AGATCGGATA CGACTTCTAG
|
Protein sequence | MKPNTSAKRH SLRYLLASTV ACIAAAPALA QSDETPDDVI VVTAQQRAQS SQDVPISLQV LDSEFIDAVA ADDMGDLEAF VPGLDVSNGS PTQPRYSIRG ITTSDFGVGT DPAVGIYVDG IYAARSGASL LAFNDIERIE VLKGPQGTLF GRNSAAGAVS IITREPSDEL EGRVAVRIGS HNRMRTEAML NLPITDTLAI RANFLSNKAD GWLTDAVTGE DYRREDSSAD RFTVRWNATP STEILLRHSR DTIDQDARPA IGIVEIPAFP GTPPLPVDTT AFLDPFNAPV RNDVVFNREA RNLAETTLTV RQDIGDMTLT SLTSYREFDT MNREDEDGTN RIDTYFDTNN VEDNEAFYQE FRLAGTTGTV DWLVGASYYD ETAIQASETF TFTDTVNTVL GNVGAGTPFT DLEYGLLVPF GLPFSMLGHS WQETMSNQGE FTARAVYADM IWSATDRLNV SVGLRYTEDE KSFQWINGGR QADSLDQTLA ALDGAGILAL AGASPADFLF DFVFDLAPLA GVACDNGVNV AEGVACVMED SWNNLSPRVV VDYQLTDNVM IYGSFSEGYK AGGYNSVEVG SRFENETVTS WEFGFKSDFL NPDLVFNMSA FSYVYEDKQS IRLVVPTGGG VPQYLVQTSD DEAIGVDIEL DWQASDALRL RGNAQWLDST HKRRVDSNGA DLAGEPTGEP YWNVAFGADY VIDLDGGSDL TLQANHAYRG ESRCNSQSVL QGTCGGYTAF ATGEARNRTD LRARWTAPNG DLTVSAFVNN VFDNQYVGGV NNITASTLGT AFASISAPRV WGLEIGYDF
|
| |