Gene Mmar10_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1946 
Symbol 
ID4286762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2128703 
End bp2129452 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content62% 
IMG OID638141446 
Productflagellar basal body rod protein 
Protein accessionYP_757176 
Protein GI114570496 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.704527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACG CAATGATGAT CGGCCTCTCG CGCCAGATGA CCCTTCGCCG GTCTATGGAC 
GTCGTGGCCA ACAATATCGC CAACGCCAAT ACAGCCGGCT TCAAGGTTGA ATCCCTGCTG
CTGGAAAACC GCGCTGCACC GACTGCCACG CATGATGACG GACCGGCCGA CATCCAGTTC
GTCAATACCT GGGGCATGGC TCGCGATTTC CGCCAGGGCG AACTCGCCTT CACCGGTCGC
GAATTTGATC TCGCCATTGA TGGCGGCGGC TTCTTCGCCG TCGAGTCGAA TGGCGAAGAG
CAATTCACCC GTGACGGCCG CTTCCGCCTT GATGGCGCCG GCCAGCTGGT CGCCTCCGAC
GGCGCGCCCG TTCTTGACGC CGACACCCGC GGCCCGATCC TGATCGACGC CTCCGCCGGC
AGTGTCCAGA TCGTCGAGGG CGGCATGATC ATGCAGAACG ACCAGCAGAT CGGCCGGATC
GGCGTGTTCG AGATCGCCAA CCGCTCGGAA ATGTCCAAGC AGGGCAATGG CCGCTACACC
ATCCCGCCGA TCGAGGATCC GGCCAACGAG CCGCTGGCCA TGATCGATGC GACGGTGAGC
CAGGGCTTTG TCGAGCAGTC CAACGTGCAG TCGATCCTCG AACTCACCGA CATGATGTCT
GTCATGCGCA GCTACCAGTC GGTCTCGAAA TTCCTTGAAC AAGCAGAAGA CCTGAGCAAG
CGCGCCATCG AGCGCCTTGG CCGGATCTGA
 
Protein sequence
MDNAMMIGLS RQMTLRRSMD VVANNIANAN TAGFKVESLL LENRAAPTAT HDDGPADIQF 
VNTWGMARDF RQGELAFTGR EFDLAIDGGG FFAVESNGEE QFTRDGRFRL DGAGQLVASD
GAPVLDADTR GPILIDASAG SVQIVEGGMI MQNDQQIGRI GVFEIANRSE MSKQGNGRYT
IPPIEDPANE PLAMIDATVS QGFVEQSNVQ SILELTDMMS VMRSYQSVSK FLEQAEDLSK
RAIERLGRI