| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1899 |
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| Symbol | |
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| ID | 4286417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 2076220 |
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| End bp | 2077875 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638141399 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_757129 |
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| Protein GI | 114570449 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.680962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.478196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATT TCGGGCGTTG GAAACTGCTT TCCATATTCC TCATCACGCT GCTCGGCGTG
ATGTACACCA TTCCCAATTT CGTGCCGGAA GAAGACCGGT TCACGATCAA TGAGGTGGAT
GGTACGGCGA CGCCCAAGGG CATCTGGCGT TTCATCCCGG CCGGGACGAT CAATCTGGGC
CTCGACCTGC AGGGCGGTTC GCACATCGTC TTTGAGGTCG ACATGGACGA GGTGCGCGAC
GCCCAGCTGG AAACGCTGGC CTCCGACATC CGCACCACGC TGCGCGATGC GCCGCCGGTT
CTGGCCCGCT CGGTCGCTGT AATCGGGGAT GAAGTCGTCG TTCTGCTGGT CCGCCCGGAA
GAGCGCGATA CTGCGCTGGA GCGGATCCGT GAGCTCAATG CGCCGGTCAC CACCGGGATC
GGTCAGGTCG GTCTGTCCAA CATGTATGAT ATCGGTGCGG ACCCGTCTGA CCCGTCGGCG
ATCCGGATCT CGGTGACCTC GCAGCAGTAT GAATCCATCC GCAACCGCAC ACTGGAACAG
TCGATCACGG TGATCCGTCG CCGTCTCGAC GGGCTGGGCA CCACCGACCC GACCATCGCC
CGCTCCGGCG ACCGCCGGGT CCTGGTGCAG GTGCCGGGTG CCGATGATCC GCAGGAGATC
ATCGACCTGG TCGGAACACA GGCGGCGATG AGCTTCCACA TGGTCGACGA GAATGTCGAT
CCGGGCCCCA ATGGCCAGGC ACGTACACCG CCGGGCGTGA CGGTCTATCC GATGGCCGAT
ACCGGCGGCA CCCAATGGCT GGCCGTCGAG ACACGCCAGC GCCTGACCGG TGAGAACCTC
AACAGTTCCA ATGTCACAAC CCATCCGAGC TATGTGGGAC CCGTGGTCGG CTTCCGGCTC
GACACGCAGG GCGCCCTGAT TTTCGGCGAG CTGACCCGGG CCAATCGTGG CCGTCGTTTT
GCCATTGTGC TCGACAATGA AATCATCACC GCACCGACGA TCAACGAACC GATCCTGTCA
GGGTCCGGGG TGATCGGCGG CAGCTACACC TATGAGACGG CCAACCAGCT CGTGATCCTG
CTCAATGCCG GTGCCCTGCC GGCCTCGCTG ACGCCGGTCG AGCAACGGGT CGTTACCGGT
ACGCTGGGTC AGGACCAGGT GGAAAGCGGC AAGCTGGCCA TCATGATCGG TTTCGCCCTG
GTCATCGTCT TCATGGTTGC CATGTATGGC GTGTTCGGCC TGTTCTCGAC CATGGCGCTT
CTGGTCAATG TCGTCCTCAT CCTGGGCGGC CTGTCGGGGC TTGGCATGAC GCTGACCCTG
CCGGGTATTG CCGGTATCAT CCTGACGATC GGCATGGCGG TGGACGCCAA TGTGCTGATC
TATGAGCGGA TCCGCGAGGA GGTGTTGAAC AATCGCACCC CGGTGCAGGC TCTACAGGCT
GGCTACGAGC GAGCCTTGGC GGCCATTCTC GACGCCAATA TCACCACCTT CATCGCTGCT
GCCGTGCTCT ACATGCTCGG TGCCGGTCCG GTGCGGGGTT TCGCGGTGAC GCTGGGTATC
GGCATCATCA CCTCGGTCTT TACGGCCTTC GTCGTCTCCC GCCTCCTGGC GGTTCTCTGG
TTGCGGGCGT TCAAGCCCAA AAAGCTGCCG CTTTAA
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| Protein sequence | MLHFGRWKLL SIFLITLLGV MYTIPNFVPE EDRFTINEVD GTATPKGIWR FIPAGTINLG
LDLQGGSHIV FEVDMDEVRD AQLETLASDI RTTLRDAPPV LARSVAVIGD EVVVLLVRPE
ERDTALERIR ELNAPVTTGI GQVGLSNMYD IGADPSDPSA IRISVTSQQY ESIRNRTLEQ
SITVIRRRLD GLGTTDPTIA RSGDRRVLVQ VPGADDPQEI IDLVGTQAAM SFHMVDENVD
PGPNGQARTP PGVTVYPMAD TGGTQWLAVE TRQRLTGENL NSSNVTTHPS YVGPVVGFRL
DTQGALIFGE LTRANRGRRF AIVLDNEIIT APTINEPILS GSGVIGGSYT YETANQLVIL
LNAGALPASL TPVEQRVVTG TLGQDQVESG KLAIMIGFAL VIVFMVAMYG VFGLFSTMAL
LVNVVLILGG LSGLGMTLTL PGIAGIILTI GMAVDANVLI YERIREEVLN NRTPVQALQA
GYERALAAIL DANITTFIAA AVLYMLGAGP VRGFAVTLGI GIITSVFTAF VVSRLLAVLW
LRAFKPKKLP L
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