| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1801 |
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| Symbol | |
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| ID | 4285382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 1950698 |
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| End bp | 1954915 |
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| Gene Length | 4218 bp |
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| Protein Length | 1405 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638141290 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_757031 |
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| Protein GI | 114570351 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.669394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.126804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACG ACGTCATGAA CATCTTCAAT CCGGCTGCCG AAGGCCCGTC CTTCGACCGG
ATCCGCATTG CCCTGGCCAG CCCGGAGAAA ATCCACTCCT GGTCCTTCGG CGAAGTGAAA
AAGCCCGAGA CGATCAATTA CCGGACCTTC AAGCCCGAGC GCGACGGCCT GTTCTGCGCC
CGCATCTTCG GACCGGTAAA GGATTACGAG TGCCTGTGCG GCAAGTACAA GCGCATCAAG
TACAAGGGTA TCGTCTGCGA GAAGTGCGGC GTTGAAGTGA CCCTGGCCCG CGTCCGTCGC
GAGCGCATGG GTCACATCGA GCTGGCTGCT CCGGTCGCCC ACATCTGGTT CCTGAAGTCG
CTGCCGTCCC GGATCGCCAT GATCCTCGAC ATGGCGCTGA AGGATGTGGA GCGGGTGCTC
TACTTCGAGA ACTACGTCGT CATCGAGCCG GGTCTGACCC CGCTCCAGCC GTTCCAGCTG
CTCTCTGAAG AAGAGTATAT GGAAGCGCAG GACGAATACG GCGAAGACGC CTTCACGGCC
GGCATCGGCG CTGAAGCGGT CCGCGAAATC CTCATCAACA TGGATCTGGA AGCCGAGTGC
GCCAAGGTCC GTGAGGACAT GAAGGAAACC GGGTCCGAGC TGAAGCTGAA GAAGTACGCC
AAGCGTCTCA AGCTGATGGA AAACTTCCTC ACCTCGGGCA ACCGCCCGGA GTGGATGATC
ATGACGGTCA TTCCGGTCAT TCCGCCGGAA CTGCGTCCGC TCGTGCCGCT CGATGGTGGC
CGTTTCGCGA CGTCGGATCT CAACGATCTC TACCGCCGCG TCATCAACCG CAACAACCGC
CTCAAGCGCC TCATCGAGCT GCGCGCGCCG GACATCATCA TCCGGAACGA AAAGCGGATG
CTGCAGGAAT CCGTCGACGC CCTGTTCGAC AATGGCCGTC GTGGCCGCGT CATCACCGGT
GCCAACAAGC GCCCGCTGAA GTCGCTGTCC GACATGCTGA AGGGCAAGCA GGGCCGGTTC
CGCCAGAACC TGCTCGGCAA GCGCGTCGAC TATTCGGGCC GTTCGGTCAT CGTGGTCGGT
CCGGATCTCA AACTGCACGA GTGCGGCCTG CCCAAGAAGA TGGCGCTCGA ACTGTTCAAG
CCCTTCATCT ATGCGCGTCT CGACGCCAAG GGTCTGTCCG GCACGGTCAA GCAGTCCAAG
AAGCTGGTCG AGAAAGAGCG TCCGGAAGTC TGGGACGTGC TCGACGAGGT CATTCGCGAA
CATCCGGTCA TGCTGAACCG GGCGCCGACC CTGCACCGTC TGGGTATCCA GGCGTTCGAG
CCGAAGCTGA TCGAGGGCAA GGCCATCCAG CTTCACCCGC TGGTCTGTGC CGCCTTCAAC
GCCGACTTTG ACGGTGACCA GATGGCTGTT CACGTTCCGC TCTCGCTGGA AGCCCAGCTG
GAAGCGCGGA CGTTGATGAT GTCCACCAAC AACATCCTCT CGCCGGCCAA TGGCAAGCCG
ATCATCGTGC CGTCGCAGGA TATCGTGCTG GGCCTCTACT ACCTGTCGAT CGAGAAGGAT
AACGAGCCGG GCGAGGGCAT GGCCTTCGGT AGCCGTGCCG AGCTGGAAGC GGCGCTCGAG
TCCGATGTCA TCACCTTGCA CACCAAGATC AAGGCGCGCT GGGAAGGCAT TGATGTCGAC
GGCAACAAGA TCACCAAGGT GATCGAGACC ACGCCGGGCC GCAAGATGCT GGTCGATCTC
CTGCCCAAGC ACGCCAAGAT GCAGCCGGAA ATGATCGGTG AGCTGCTCAC AAAGAAAGCC
ATCGGCGCCC TGATTGATCA GGTCTATCGC CACTGTGGCC AGAAGGCGAC GGTCATCTTC
TGTGACCAGA TCATGGGGCT CGGCTTCAAG GAAGCGGCCA AGGCCGGCAT TTCCTTCGGC
AAGGACGACA TGCTGATCCC GGACGCCAAG GCCGATCTGG TCGGTGCGAC CCGCGACATG
GTGTCGGATT ACGAGCAGCA ATATGTCGAC GGTCTGATCA CCAAGGGTGA GAAGTACAAC
AAGGTCGTTG ATGCCTGGGC CAAGTGTACC GACAACGTCG CTGACGCCAT GATGGACGAG
ATCTCCAAGA CCTCGGTCGG CGAAGACGGC CGGACGTCGG AAGTGAACTC GGTCTACATG
ATGGCCCACT CCGGTGCTCG TGGTTCGAAG AACCAGATGA AGCAGCTGGC CGGCATGCGC
GGCCTGATGG CCAAGCCATC GGGCGAGATC ATCGAGACGC CGATCATCTC GAACTTCAAG
GAGGGCCTGA CCGTCCTTGA ATACTTCAAC TCCACGCACG GTGCCCGTAA GGGTCTGGCC
GACACCGCCC TGAAGACGGC CAACTCGGGT TACCTGACCC GTCGTCTCGT CGATGTCGCC
CAGGACTGCA TCATCACCGA AGAAGACTGT GGCACGTCCG AAGGCTTCGA GATCCAGGCG
GTTGTCGATG GCGGTGATGT TGTCGTCTCG CTGGAACAGC GCATTCTCGG CCGCACCCTG
GCCGCGGAAG TGAAGGATCC GGCGTCCGGC GAAGTGATCT GCCCGGCCGA CACCTATGTC
GACGAAGACC TCGCCATGGC GATCGAAATG GCCGGCGTCC AGAGCGTCAT CGCACGCTCG
CCGCTGACCT GTGAGACCCG TGTCGGTGTC TGTGCGACCT GTTATGGCCG TGATCTGGCG
CGCGGTACGC GCGTCAATAT CGGTGAGGCT GTCGGCGTCA TCGCGGCACA GTCGATCGGT
GAGCCGGGTA CCCAGCTGAC CATGCGGACC TTCCACATTG GTGGTACCGC CCAGGTCTCC
GAGCAATCCT TCATCGAGGC CGGTTCGGAA GGCAAGGTGA CCTTCAAGAA CCCGTCTACC
GTGACCAATT CCGACGGCGA TCTGATCGCC CTGTCGCGCA ATATGCAGCT CGTTATCGTC
GATACCGAGG GCAAGGAGCG CGAGAGCTAC AAGCTGGGTT ACGGCACCAA GCTGAAGGTC
AAGGAAGGCG ACAAGACCAC CCGCGGCCAA CGCCTCGGCG AGTGGGACCC GTATACGGCT
CCGGTCGTGT CGGAAGTCGG CGGCAAGGTG AAATTCGTCG ACATCGCCGA AGGCGTGTCG
GTGAAGGAAG AGACAGACGA AGCCACGGGT ATCGCCTCCA AGGTGGTCAT CGACTGGCGG
GGTTCGGCCA AGGCCAATGC GCTGCAGCCG ACGATCGTCG TGCAGGACGA GAATGGTGAG
CCGATCAAGC TCTCCTCCGG TTCCACCGCC AGCTACATGC TGGCCGTTGG CGCCATTCTC
TCGGTTGCCG ATGGCGACAC GGTCCGTCCG GGTGACATTG TCGCCCGTAT CCCGACGGAA
GGCGCCAAGA CGCGCGACAT CACCGGTGGT CTGCCGCGTG TTGCCGAGCT GTTCGAAGCC
CGTCGTCCCA AGGATCACGC GGTCATCGCC GAGATCACCG GTCGGGTCGA GTTCGGCCGC
GACTACAAGA ACAAGCGCCG TATCGCGATT GTTCCGGAAG GTGACGAGGC CGAGAAGGTC
GAATACCTGG TGCCGAAGGG CAAACACCTG ACCTGTCAGG AAGGCGATGT GATCCAGAAG
GGCGAATACC TGCTCGACGG TCACCCGGCG CCGCACGATA TCCTGGCGAT CCTGGGTGTT
CCGGCCCTGG CCAATTACCT GATCGACGAG ATCCAGGAGG TCTATCGACT GCAGGGCGTG
CCGATCAACG ACAAGCACAT CGAGACGATC GTTCGTCAGA TGCTGCAGAA GATCGAGGTC
AAGGATCCGG GCGAGAGCAC GTATCTGGCC GCCGAACAGG TCGACAAGAT CGAGTTCATC
GAGACCAATG AACGGCTCGA GGCCGAAGGC AAGCGCATGG CGACCGGTGA CCCGGTCCTG
CTGGGCATCA CCAAGGCGTC GCTGCAGACG CGCTCCTTCA TCTCGGCCGC CTCCTTCCAG
GAGACCACCC GCGTCCTCAC CGAGGCGGCA GTCCAGGGCA AGGAAGACAC GCTCGAGGGC
CTGAAGGAAA ACGTCATCGT GGGCCGACTG ATTCCCGCCG GCACGGGCGC CATCATGCGC
CAGTACCAGG TGATCGCTGA TGATCTGGAT GCGGACATGC TCGCCGAGCG CGAAGCCGCT
GTTGAGGCCG AAGGTCTTCC GACCGAGATT GCCGAGGCAG CTGCAGAGGA AATGGCCGCA
GAAGAGGGCG CCAGCTAG
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| Protein sequence | MNHDVMNIFN PAAEGPSFDR IRIALASPEK IHSWSFGEVK KPETINYRTF KPERDGLFCA
RIFGPVKDYE CLCGKYKRIK YKGIVCEKCG VEVTLARVRR ERMGHIELAA PVAHIWFLKS
LPSRIAMILD MALKDVERVL YFENYVVIEP GLTPLQPFQL LSEEEYMEAQ DEYGEDAFTA
GIGAEAVREI LINMDLEAEC AKVREDMKET GSELKLKKYA KRLKLMENFL TSGNRPEWMI
MTVIPVIPPE LRPLVPLDGG RFATSDLNDL YRRVINRNNR LKRLIELRAP DIIIRNEKRM
LQESVDALFD NGRRGRVITG ANKRPLKSLS DMLKGKQGRF RQNLLGKRVD YSGRSVIVVG
PDLKLHECGL PKKMALELFK PFIYARLDAK GLSGTVKQSK KLVEKERPEV WDVLDEVIRE
HPVMLNRAPT LHRLGIQAFE PKLIEGKAIQ LHPLVCAAFN ADFDGDQMAV HVPLSLEAQL
EARTLMMSTN NILSPANGKP IIVPSQDIVL GLYYLSIEKD NEPGEGMAFG SRAELEAALE
SDVITLHTKI KARWEGIDVD GNKITKVIET TPGRKMLVDL LPKHAKMQPE MIGELLTKKA
IGALIDQVYR HCGQKATVIF CDQIMGLGFK EAAKAGISFG KDDMLIPDAK ADLVGATRDM
VSDYEQQYVD GLITKGEKYN KVVDAWAKCT DNVADAMMDE ISKTSVGEDG RTSEVNSVYM
MAHSGARGSK NQMKQLAGMR GLMAKPSGEI IETPIISNFK EGLTVLEYFN STHGARKGLA
DTALKTANSG YLTRRLVDVA QDCIITEEDC GTSEGFEIQA VVDGGDVVVS LEQRILGRTL
AAEVKDPASG EVICPADTYV DEDLAMAIEM AGVQSVIARS PLTCETRVGV CATCYGRDLA
RGTRVNIGEA VGVIAAQSIG EPGTQLTMRT FHIGGTAQVS EQSFIEAGSE GKVTFKNPST
VTNSDGDLIA LSRNMQLVIV DTEGKERESY KLGYGTKLKV KEGDKTTRGQ RLGEWDPYTA
PVVSEVGGKV KFVDIAEGVS VKEETDEATG IASKVVIDWR GSAKANALQP TIVVQDENGE
PIKLSSGSTA SYMLAVGAIL SVADGDTVRP GDIVARIPTE GAKTRDITGG LPRVAELFEA
RRPKDHAVIA EITGRVEFGR DYKNKRRIAI VPEGDEAEKV EYLVPKGKHL TCQEGDVIQK
GEYLLDGHPA PHDILAILGV PALANYLIDE IQEVYRLQGV PINDKHIETI VRQMLQKIEV
KDPGESTYLA AEQVDKIEFI ETNERLEAEG KRMATGDPVL LGITKASLQT RSFISAASFQ
ETTRVLTEAA VQGKEDTLEG LKENVIVGRL IPAGTGAIMR QYQVIADDLD ADMLAEREAA
VEAEGLPTEI AEAAAEEMAA EEGAS
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