Gene Mmar10_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1797 
Symbol 
ID4285378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1946157 
End bp1947347 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content61% 
IMG OID638141286 
Productelongation factor Tu 
Protein accessionYP_757027 
Protein GI114570347 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.871801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0555959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGG AAAAGTTTGA GCGCACCAAG CCGCACGCGA ACATCGGCAC GATTGGTCAC 
GTTGACCACG GCAAGACGAC GCTGACGGCT GCGATCACGA TGGTACTGGC GGAAGCGTCC
GGCGGTACTG CGAAGGGTTA TGACGAGATT GACAGTGCGC CTGAAGAAAA GGCACGCGGC
ATCACCATCT CGACGGCTCA CGTTGAGTAT GAGACGGCCA ACCGTCACTA CGCCCACGTT
GATTGCCCGG GCCACGCTGA CTATGTGAAG AACATGATCA CGGGTGCGGC GCAGATGGAC
GGCGCGATCC TGGTTGTGAA CGCCGCTGAC GGCCCGATGC CGCAGACGCG CGAGCACATC
CTGCTGGCCC GCCAGGTTGG CGTTCCGGCG CTGGTGGTTT TCCTGAACAA GGTTGACCAG
GTTGACGATG AAGAGCTGCT CGAGCTGGTC GAGATGGAAG TTCGCGAACT TCTGTCCTCC
TACGAGTTCC CGGGCGACGA TCTGCCGATC GTTGCGGGTT CGGCTCTGGC GGCTGTTGAA
GGTCGTGACG ATCATATCGG CAAGGACAAG ATCCTTGAGC TGATGGCGGC TGTGGATGAG
TACATCCCGA CGCCTGAGCG TCCGATCGAC CAGCCTTTCC TGATGCCGAT CGAGGACGTG
TTCTCGATCT CGGGCCGCGG CACGGTCGTG ACCGGCCGTA TCGAGCGCGG TGTCGTCAAG
GTTGGTGAAG AGATCGAAAT CGTCGGTGTC CGTGACACCA CGAAGACGAC CTGCACCGGC
GTCGAGATGT TCCGCAAGCT GCTCGATCAG GGCCAGGCTG GCGACAATGT CGGCGTGCTG
CTTCGCGGCG TGGACCGTGA AGGTGTCGAG CGTGGCCAGG TCCTGGCCAA GCCGGGCTCC
ATCACGCCGC ACCACAAGTT CGTGGCAGAA GCCTATATCC TGACCAAGGA AGAGGGTGGC
CGTCACACGC CGTTCTTCAC CAATTACCGC CCGCAGTTCT ACTTCCGCAC CACCGACGTT
ACCGGTGTTG TGACGCTGAA CGAAGGTACG GAAATGGTGA TGCCGGGCGA CAATATCGAA
ATGAATGTCG AGCTGATCGT GCCGATCGCC ATGGAAGAGA AGCTCCGCTT CGCAATCCGT
GAAGGTGGCC GCACCGTCGG CGCCGGCGTC GTCTCGAAAA TCATCGAGTA G
 
Protein sequence
MAKEKFERTK PHANIGTIGH VDHGKTTLTA AITMVLAEAS GGTAKGYDEI DSAPEEKARG 
ITISTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVVNAAD GPMPQTREHI
LLARQVGVPA LVVFLNKVDQ VDDEELLELV EMEVRELLSS YEFPGDDLPI VAGSALAAVE
GRDDHIGKDK ILELMAAVDE YIPTPERPID QPFLMPIEDV FSISGRGTVV TGRIERGVVK
VGEEIEIVGV RDTTKTTCTG VEMFRKLLDQ GQAGDNVGVL LRGVDREGVE RGQVLAKPGS
ITPHHKFVAE AYILTKEEGG RHTPFFTNYR PQFYFRTTDV TGVVTLNEGT EMVMPGDNIE
MNVELIVPIA MEEKLRFAIR EGGRTVGAGV VSKIIE