Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1783 |
Symbol | rplE |
ID | 4284701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1939644 |
End bp | 1940204 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638141272 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_757013 |
Protein GI | 114570333 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0286744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0861525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATA CCGCCACATA CACACCGCGT CTTCGCGCCA AGTACACGGA AACCATCCGT GCGGCGATGA AGGAAAAGTT CGGCTATGCC AATGACATGA TGATCCCGCG TCTGGACAAG ATCGTGATCA ATATGGGCGT CGGCGAGGCC TCCCAGGACT CCAAGAAGAT CAAGGGTGCC CTGGAAGACC TGGAAGCCAT TACCGGCCAG AAGCCGGTCA AGACGGTCGC CAAGAAGTCC ATCGCGGGCT TCAAGCTCCG TGAGGAGCAG GTGATCGGTG CGAAAGTGAC CCTGCGCCAG GACCGTATGT ACGAATTCCT GGACCGCCTG ATCACCATCG CCCTGCCACG CGTGCGTGAC TTCCGTGGGC TCAATGGTAA GAGCTTCGAC GGTCGCGGAA ATTACGCGAT GGGTATGAAA GAACATATCG TGTTCCCGGA GATCGACTAC GACAAGGTCG AGAAGATCCG GGGTATGGAT ATCGTTGTCT GCACGACTGC CGGCAATGAT GAGGAAGCGA AGGCCCTGCT GGCCGAGTTC GATTTCCCCT TTACGAACTG A
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Protein sequence | MSDTATYTPR LRAKYTETIR AAMKEKFGYA NDMMIPRLDK IVINMGVGEA SQDSKKIKGA LEDLEAITGQ KPVKTVAKKS IAGFKLREEQ VIGAKVTLRQ DRMYEFLDRL ITIALPRVRD FRGLNGKSFD GRGNYAMGMK EHIVFPEIDY DKVEKIRGMD IVVCTTAGND EEAKALLAEF DFPFTN
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