Gene Mmar10_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1783 
SymbolrplE 
ID4284701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1939644 
End bp1940204 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content57% 
IMG OID638141272 
Product50S ribosomal protein L5 
Protein accessionYP_757013 
Protein GI114570333 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0286744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0861525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATA CCGCCACATA CACACCGCGT CTTCGCGCCA AGTACACGGA AACCATCCGT 
GCGGCGATGA AGGAAAAGTT CGGCTATGCC AATGACATGA TGATCCCGCG TCTGGACAAG
ATCGTGATCA ATATGGGCGT CGGCGAGGCC TCCCAGGACT CCAAGAAGAT CAAGGGTGCC
CTGGAAGACC TGGAAGCCAT TACCGGCCAG AAGCCGGTCA AGACGGTCGC CAAGAAGTCC
ATCGCGGGCT TCAAGCTCCG TGAGGAGCAG GTGATCGGTG CGAAAGTGAC CCTGCGCCAG
GACCGTATGT ACGAATTCCT GGACCGCCTG ATCACCATCG CCCTGCCACG CGTGCGTGAC
TTCCGTGGGC TCAATGGTAA GAGCTTCGAC GGTCGCGGAA ATTACGCGAT GGGTATGAAA
GAACATATCG TGTTCCCGGA GATCGACTAC GACAAGGTCG AGAAGATCCG GGGTATGGAT
ATCGTTGTCT GCACGACTGC CGGCAATGAT GAGGAAGCGA AGGCCCTGCT GGCCGAGTTC
GATTTCCCCT TTACGAACTG A
 
Protein sequence
MSDTATYTPR LRAKYTETIR AAMKEKFGYA NDMMIPRLDK IVINMGVGEA SQDSKKIKGA 
LEDLEAITGQ KPVKTVAKKS IAGFKLREEQ VIGAKVTLRQ DRMYEFLDRL ITIALPRVRD
FRGLNGKSFD GRGNYAMGMK EHIVFPEIDY DKVEKIRGMD IVVCTTAGND EEAKALLAEF
DFPFTN