Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1780 |
Symbol | |
ID | 4284698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1938328 |
End bp | 1938861 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638141269 |
Product | 50S ribosomal protein L6P |
Protein accession | YP_757010 |
Protein GI | 114570330 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0224285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.119374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGTA TCGGTAAACT CCCGGTAGCC ATTCCTGGCG GCGTCACGGC GACGCTTTCC AAGACCGCGC TGACCGTCAA GGGTCCCAAG GGCGAATTGT CCATGACCTT CGTCGATGAA GTGAGCGCCG AGCAGGGTGA AGACGGTATC GTCATCTCCC CGCGCGATGA GACCAAGAAG GCTCGCGCGA TGTGGGGCAT GCAACGTGCT CTCGTCGCCA ACCTGGTCCA GGGTGTCACG GCTGGTTACG AAAAGAATCT CGAGCTGGTC GGTGTTGGTT ACCGGGCACA GATGCAGGGC ACGTCCCTGA AACTGTCGCT CGGCCTGTCC CATGACGTCG TTTACGACGC GCCTGAGGGC ATCACCATCG CCGTCGGCAA GCCGACCGAA GTGAAGATCA CGGGCGCTGA CAAGCAGCGC GTTGGCCAGG TGGCCGCCGA GATTCGTCGC TTCCGTCCGC CGGAGCCCTA CAAGGGCAAG GGCATCAAAT ATGTCGGCGA GTATATCCGC CGCAAAGAAG GCAAGAAGAA GTAG
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Protein sequence | MSRIGKLPVA IPGGVTATLS KTALTVKGPK GELSMTFVDE VSAEQGEDGI VISPRDETKK ARAMWGMQRA LVANLVQGVT AGYEKNLELV GVGYRAQMQG TSLKLSLGLS HDVVYDAPEG ITIAVGKPTE VKITGADKQR VGQVAAEIRR FRPPEPYKGK GIKYVGEYIR RKEGKKK
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