Gene Mmar10_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1780 
Symbol 
ID4284698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1938328 
End bp1938861 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content61% 
IMG OID638141269 
Product50S ribosomal protein L6P 
Protein accessionYP_757010 
Protein GI114570330 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0224285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.119374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGTA TCGGTAAACT CCCGGTAGCC ATTCCTGGCG GCGTCACGGC GACGCTTTCC 
AAGACCGCGC TGACCGTCAA GGGTCCCAAG GGCGAATTGT CCATGACCTT CGTCGATGAA
GTGAGCGCCG AGCAGGGTGA AGACGGTATC GTCATCTCCC CGCGCGATGA GACCAAGAAG
GCTCGCGCGA TGTGGGGCAT GCAACGTGCT CTCGTCGCCA ACCTGGTCCA GGGTGTCACG
GCTGGTTACG AAAAGAATCT CGAGCTGGTC GGTGTTGGTT ACCGGGCACA GATGCAGGGC
ACGTCCCTGA AACTGTCGCT CGGCCTGTCC CATGACGTCG TTTACGACGC GCCTGAGGGC
ATCACCATCG CCGTCGGCAA GCCGACCGAA GTGAAGATCA CGGGCGCTGA CAAGCAGCGC
GTTGGCCAGG TGGCCGCCGA GATTCGTCGC TTCCGTCCGC CGGAGCCCTA CAAGGGCAAG
GGCATCAAAT ATGTCGGCGA GTATATCCGC CGCAAAGAAG GCAAGAAGAA GTAG
 
Protein sequence
MSRIGKLPVA IPGGVTATLS KTALTVKGPK GELSMTFVDE VSAEQGEDGI VISPRDETKK 
ARAMWGMQRA LVANLVQGVT AGYEKNLELV GVGYRAQMQG TSLKLSLGLS HDVVYDAPEG
ITIAVGKPTE VKITGADKQR VGQVAAEIRR FRPPEPYKGK GIKYVGEYIR RKEGKKK