| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1716 |
|---|
| Symbol | |
|---|
| ID | 4286172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1882760 |
|---|
| End bp | 1883923 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638141204 |
|---|
| Product | DNA protecting protein DprA |
|---|
| Protein accession | YP_756946 |
|---|
| Protein GI | 114570266 |
|---|
| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
|---|
| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.913278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.251857 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGC CGGGGCCCAG CCACACCGAA AGGGTGATGT GGTTGCGCCT CGCGCGGACA
AGAGGGTTGG GCGCGATCGG ATTTGCCCGG GCGATCGCCC ATTACGGCAA TGCCGCCGAC
GCCATTGACG ACCTGCCCGC GCGGGCCCGG TCTGCCGGTC GGCGGGTGCT CGACATCCCC
AGCCCGGAGA CGGTCGAAGC CGAAATGGAA CAGATCGAGC GTGTCGGCGC GCGTCTGATC
ACCGGTCTGG ATCCGGACTA TCCCGCCCTG CTCGCCGCGA TACCGGGGCC GCCGCCAACC
CTGATCGTGC GCGGCAATCT GTCCCTGCTG GACCGCCCGG CCTGCGCCAT GGTCGGGGCC
CGCAACGCCT CGGCGGTCGG GCTGAGATTT GCCCGTGAGC TGGCCAATGG ACTGGGCCGC
GAGGATATCG TGGTCGTGTC CGGCCTCGCA CGCGGTATTG ATGGGGCGGC CCATTCCGGC
GCTCTGGAAA GCGGAACCAT CGCCGTGCTC GCCGGCGGGA TTGATCACAT CTATCCGCCC
GAACATGGCG AGCTGCACGC CCGCCTGGGC GAGGACGGGC TACTGCTGTC CGAAGTCCCG
TTGGGCCAGT CCCCGACCGC GCGCGATTTT CCGCGCCGCA ACCGCCTCAT CTCCGGGCTG
GCACTGGGCA CGCTGGTGGT CGAGGCCGCG CTTCGCTCGG GCTCCCTCAT CACCGCGCGC
TATGCCGCCG AGCAGGGACG CGAAGTGATG GCGGTTCCCG GATCGCCGCT CGATCCACGT
GCCCGCGGCT CCAACCAGCT CCTGCGCGAT GGCGCCCATC TGATCGAATC CGTCGATGAT
GTGCTGGACA TCCTGTCGAA GGCCCGCCGT CCCGAACCGC CCGGGCACGG GCTGGAGGAT
CTGCCGGCAA TGAGCCTGCC GGACCTGTTC GATGACGAGG AGGCGGGCCT GTCGACTGAT
GAAGGCTTGT CGAACACCTC TGCCCTGTCC CCCCTGGAAC GCCTGCGCGC CCTCCTGTCG
CCAGCTCCGG TATCGGGTGA TGAACTGGCC CGCGCCGCCG ACCTGCCCAT CGGCGAAGTC
CAGGCGATGC TGATGGAGAT GGAGATGAGT GGAGAGATCG CGACCCTGCC CGACGGGCTG
GTTCAACGCC GGCGCCAGAG CTGA
|
|---|
| Protein sequence | MTQPGPSHTE RVMWLRLART RGLGAIGFAR AIAHYGNAAD AIDDLPARAR SAGRRVLDIP
SPETVEAEME QIERVGARLI TGLDPDYPAL LAAIPGPPPT LIVRGNLSLL DRPACAMVGA
RNASAVGLRF ARELANGLGR EDIVVVSGLA RGIDGAAHSG ALESGTIAVL AGGIDHIYPP
EHGELHARLG EDGLLLSEVP LGQSPTARDF PRRNRLISGL ALGTLVVEAA LRSGSLITAR
YAAEQGREVM AVPGSPLDPR ARGSNQLLRD GAHLIESVDD VLDILSKARR PEPPGHGLED
LPAMSLPDLF DDEEAGLSTD EGLSNTSALS PLERLRALLS PAPVSGDELA RAADLPIGEV
QAMLMEMEMS GEIATLPDGL VQRRRQS
|
|---|
| |