| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1625 |
|---|
| Symbol | |
|---|
| ID | 4284595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1780045 |
|---|
| End bp | 1781331 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638141112 |
|---|
| Product | isocitrate lyase |
|---|
| Protein accession | YP_756855 |
|---|
| Protein GI | 114570175 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2224] Isocitrate lyase |
|---|
| TIGRFAM ID | [TIGR01346] isocitrate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.270498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.451985 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTT TTGCGGAACT GGTCCCCAAC ACGGCCGATG ATCGTTTCAA CGGTATCGAG
CGTCCCTACT CCCCCGAAGA CGTGCAGAAG CTGCGCGGCT CGATCACCAT CAGCCAGACC
CTGGCCGAGC GCGGTGCCAA CAAGCTGTGG GAGCTCCTGA AGACCGAACC CTATATCAAC
GCGCTGGGCG CGCTGTCAGG CAATCAGGCC ATGCAGATGG TCCGCGCCGG GCTGAAGGCC
ATCTACCTGT CCGGTTGGCA GGTCGCCGCC GACGCCAACA CGGCCGGCAC CATGTATCCC
GACCAGTCGC TCTACCCGGC CAATTCGGCC CCGGAACTGG CCAAGAAGAT CAACCGCGCC
CTGCAGCGCG CCGACCAGAT CGAAGTGTCC GAGACCGGCG AGGCCAGCCG TGACTGGTTT
GCCCCGATCG TCGCCGATGC CGAGGCCGGT TTTGGCGGCA CGCTGAACTG CTTTGAAATC
ATGAAGGCCT TCATCGAAGC CGGTGCTGCC GGCGTCCATT TCGAAGACCA GGTCGCAGCC
GAAAAGAAAT GTGGCCATCT GGGCGGCAAG GTGTTGATCC CGACCAGCCA GCACGAGCGC
AATCTCGCTG CGGCCCGTCT CGCCGCCGAT GTCATGGGTG TCTCGACGAT CACCGTTGCC
CGGACCGATG CCGAATCCGC CAACCTGATC AATTCCGACA TCGACGAGCG CGACCATGAA
TTCATCGATT TCGACGCTGG CCGCACGCCG GAAGGCTTCT TCCGCCTGAA GGAAGGCGTT
GGCGTTGATC ACTGCATCAA GCGTGGCCTG GCCTATGCCA AGATCGCCGA CCTGTTGTGG
TGGGAAACCT CCAAGCCGAA TCTCGACGAA GCCCGCCGCT TCGCTGAGGC GATCCAGAAG
GAATTCCCGG GCAAGATGAT GGCGTACAAC TGCTCGCCGT CCTTCAATTG GGAAGCCAAT
CTGGACAAGG CCACGATTGA AACCTACCAG CAGGAACTCG GCGCCATGGG CTACAAGTTC
CAGTTCGTGA CCCTGGCCGG CTTCCACCAG CTCAACCACG GCATGTTCGA ACTGGCTCGC
GGCTACAAGT CGCGTGGCAT GGGTGCCTAT TCCGAGCTGC AACAGGCCGA GTTCGCGTCC
GAAACCGATG GCTACACCGC AACGCGTCAC CAGCGCGAAG TCGGCACCGG CTATTTCGAC
AAGGTCTCGC TGGCCATTTC CGGCGGCAAG GCCTCGACCA CGGCCATGGG CGAATCCACC
GAGTCAGCCC AGTTCGCAGC CGAGTAA
|
|---|
| Protein sequence | MTTFAELVPN TADDRFNGIE RPYSPEDVQK LRGSITISQT LAERGANKLW ELLKTEPYIN
ALGALSGNQA MQMVRAGLKA IYLSGWQVAA DANTAGTMYP DQSLYPANSA PELAKKINRA
LQRADQIEVS ETGEASRDWF APIVADAEAG FGGTLNCFEI MKAFIEAGAA GVHFEDQVAA
EKKCGHLGGK VLIPTSQHER NLAAARLAAD VMGVSTITVA RTDAESANLI NSDIDERDHE
FIDFDAGRTP EGFFRLKEGV GVDHCIKRGL AYAKIADLLW WETSKPNLDE ARRFAEAIQK
EFPGKMMAYN CSPSFNWEAN LDKATIETYQ QELGAMGYKF QFVTLAGFHQ LNHGMFELAR
GYKSRGMGAY SELQQAEFAS ETDGYTATRH QREVGTGYFD KVSLAISGGK ASTTAMGEST
ESAQFAAE
|
|---|
| |