| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1616 |
|---|
| Symbol | |
|---|
| ID | 4283938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1769733 |
|---|
| End bp | 1770050 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638141103 |
|---|
| Product | TrpR like protein, YerC/YecD |
|---|
| Protein accession | YP_756846 |
|---|
| Protein GI | 114570166 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4496] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01321] trp operon repressor, proteobacterial
[TIGR02531] TrpR-related protein YerC/YecD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.405798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC CCGCAGCGGG CCGCAGTGAC GGACCCACCG ATCTCAGCGC CTTGAGCGCC
GCCATACTCG CCCTGAAGGA CGCCGGGGAG GCCGAGCGCT TTTTGCGCGA TCTCCTGACC
CCGGGCGAGA TGAAGACGCT GACCGAGCGC TGGCGTGTGG CCGGCCTGTT GGCCGAGGGC
GGGCATTCCT ATCGTGAAAT ATCCGAAATG ACGGGCGCCA GTACCACCAC CGTGACCCGT
GTTGCCCGTT TTCTCAGCCA GGAACCCTGG CAGGGCTACC GCACCATTCT CAACCGCCTC
AAGGAGACCG GATCGTGA
|
|---|
| Protein sequence | MTDPAAGRSD GPTDLSALSA AILALKDAGE AERFLRDLLT PGEMKTLTER WRVAGLLAEG
GHSYREISEM TGASTTTVTR VARFLSQEPW QGYRTILNRL KETGS
|
|---|
| |