| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1562 |
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| Symbol | |
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| ID | 4285661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | + |
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| Start bp | 1710588 |
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| End bp | 1712180 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638141049 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_756792 |
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| Protein GI | 114570112 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.240589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCT TTATCGAACT CCTGCCCTTC CTGATGTTCC TGGCAGCCTT TGCTGCCCTT
CTTCGCGGCT ATCCAGTGGC CTTCACCCTC GCCGGTGTCG CCCTGGGTTT TGCCCTGATC
GGCATGGCGA TCGGCGAGTT TGACCCGATC CATTTTCGTG CTTTCCCGCA GCGTATCTAC
GGCAATCTGA TGGAGATGGA CCGGCAGATC CTGGTCGCCG TGCCATTGTT TGTCTTCATG
GGCGTGATGC TGGAGAAGTC GAAGATCGCC GAGGAATTGC TTGAGGCGAT GGGCGCCCTG
TTCGGCTCGA TGCGCGGCGG GCTGGGAATT TCGGTCGTCA TTGTCGGCGG TCTGCTGGCG
GCTTCGACCG GGATTGTCGG TGCAACGGTT GTGACCATGG GGCTGCTTTC CCTGCCCACC
ATGCTCAAGC GCGGCTACGA CCCGGCCCTG GCCACCGGTA CAATCGCTGC GTCTGGCACG
CTCGGCCAGA TCATCCCGCC CTCCATCGTC CTGGTGCTGC TCGGAGACCA GATTTCCAAC
GCCTATCAGG AAGCCCAGCG GGCACAGGGT ATTTTCTCGC CCGACATCGT CTCCGTCGGC
GACCTGTTCG CTGGCGCCCT CATTCCCGGC ATTCTCCTGG TCACGCTGTA TATCGGCTAT
CAGATTGTCA TGGCGATCAT GAAGCCGGAC AGTGCGCCGG CTGCGCCGGC TGAGGGCAAG
GTCACGCTGG GCGGCCTCCT GCACGCACTG GTGCCGCCCC TGGCCCTGAT CATCGGCGTT
CTCGGCTCAA TCCTGACCGG GCTGGCAACG CCCACCGAAG CGGCGGGTGT CGGGGCAGTC
GGCGCGACCT TTATCGCCGG TGCCCGCAAT GCCGGTCGCG ACAGCAATCC CCGCCTCGGC
CAGCTGGTCA GCTATCTGGG ACTGGCGGCC CTGCTCGGCC TGATCGCGCT TGTGGTCACT
GCCAATATCG GTGCAGAGCG CCGCCTGTAT GTCGCCGATC TGGGCGCACT TGGCGGCGTG
CTGACCGGAG TGTTTGTGGC CATCACCCTG CTGGGTGCCG GCTGGAGCCT GATCCGCCTC
AAGCGCTCCG GCGTTCTCGA CGAGGTCATG AACTCAACCG CGATGATCTC GGCCATGGTG
TTCGTGATCC TGATCGGGGC CTCCCTGTTT TCCCTGATCT TCCGCGAGCT CGGCGGCGAC
GACACCGTGG CCGCAGCACT GCATGCCGTT CCGGGCGGGG TCTTCGGCGC CGTCGCGGTG
GTCATGCTGG TGATGTTCAT CCTCGGCTTC TTCCTCGACT TCATCGAGAT CACATTCGTG
GTCGTGCCGA TCGTCGCGCC GATCCTGTTG ATGATGGGCG TCGACCCGGT CTGGTTGGGG
GTCTTGATGG CCATGAACCT GCAGACCAGC TTCCTGACGC CGCCTTTCGG CTTCGCCCTC
TTCTATCTGC GCGGCGTGGC GCCAAAAACC GTCAAGACCA CCGATATCTA TCGCGGCGCC
ATTCCCTTCG TGATCATCCA GATACTGGCC ATCATCGCTG TTGCCACCTT CCCATGGCTG
GCGACCGGCC TGCCGCAATG GCTGTACGGC TAG
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| Protein sequence | MALFIELLPF LMFLAAFAAL LRGYPVAFTL AGVALGFALI GMAIGEFDPI HFRAFPQRIY
GNLMEMDRQI LVAVPLFVFM GVMLEKSKIA EELLEAMGAL FGSMRGGLGI SVVIVGGLLA
ASTGIVGATV VTMGLLSLPT MLKRGYDPAL ATGTIAASGT LGQIIPPSIV LVLLGDQISN
AYQEAQRAQG IFSPDIVSVG DLFAGALIPG ILLVTLYIGY QIVMAIMKPD SAPAAPAEGK
VTLGGLLHAL VPPLALIIGV LGSILTGLAT PTEAAGVGAV GATFIAGARN AGRDSNPRLG
QLVSYLGLAA LLGLIALVVT ANIGAERRLY VADLGALGGV LTGVFVAITL LGAGWSLIRL
KRSGVLDEVM NSTAMISAMV FVILIGASLF SLIFRELGGD DTVAAALHAV PGGVFGAVAV
VMLVMFILGF FLDFIEITFV VVPIVAPILL MMGVDPVWLG VLMAMNLQTS FLTPPFGFAL
FYLRGVAPKT VKTTDIYRGA IPFVIIQILA IIAVATFPWL ATGLPQWLYG
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