| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1536 |
|---|
| Symbol | |
|---|
| ID | 4286062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1687119 |
|---|
| End bp | 1687604 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638141023 |
|---|
| Product | ribonucleotide reductase regulator NrdR-like protein |
|---|
| Protein accession | YP_756766 |
|---|
| Protein GI | 114570086 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
|---|
| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000992096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTGTC CTTTTTGCGG TCATCCCGAC ACCCAAGTGA AAGATTCCCG TCCTGCCGAG
GACGGGAATG CCATCCGGCG TCGGCGGCAA TGTCCGTCCT GCGCCGCCCG TTTCACCACG
TTCGAGCGCG TGCAACTTCG CGAGCTGACG GTGATGAAGA AATCCGGGCG CCGGGTTCCA
TTTGACCGCG AAAAGCTCAA TCGCTCGATC CAGCTCGCCA TGCAAAAGCG CAATATCGAG
CCCGACCGGA TCGACCAGAT GATCTCCGGC ATCGTGCGGC GTCTCGAATC GACGGGCGAA
ACCGATGTCA CCTCCGACCG TGTCGGCGAG CTGGTGATGG AGGGGCTGAA GAATCTCGAT
GCCGTCGCCT ATGTCCGGTA TGCCTCGGTG TACAAGGACT TCCACAAGGT CGAAGACTTC
CGCGAATTCA TCACCGATGA AGCTCTGACG GCCCATTTCG GTCCTCGCGA AGACGACGAC
GGATGA
|
|---|
| Protein sequence | MRCPFCGHPD TQVKDSRPAE DGNAIRRRRQ CPSCAARFTT FERVQLRELT VMKKSGRRVP
FDREKLNRSI QLAMQKRNIE PDRIDQMISG IVRRLESTGE TDVTSDRVGE LVMEGLKNLD
AVAYVRYASV YKDFHKVEDF REFITDEALT AHFGPREDDD G
|
|---|
| |