| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1531 |
|---|
| Symbol | nusB |
|---|
| ID | 4286057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1683895 |
|---|
| End bp | 1684377 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638141018 |
|---|
| Product | transcription antitermination protein NusB |
|---|
| Protein accession | YP_756761 |
|---|
| Protein GI | 114570081 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0468647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.834868 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACTG CCAGCAAGGA ATCACCATCT GAAAACCGCG CCCGCCTGCG CCGTGCCGCA
CGGCTGTCGG CGGTCCAGGC CCTCTACCAG ATGGAGATTG GTGGTCTCGG CGCCAGCGCG
GTCATCCGCG AATTCCGCGA GCACCGTTTC GGTGCCTGCG GCGAGGCTCC CGAATTCGTC
GAGGCCGATG AGGATTTCTT CGAGAGCCTG GTCGCCGGAG TCGTCGAACG CCAGGCCGAT
GTCGATCCGG CGATGGACGC GCTGCTGGCC GACAAGTGGC GGCTCGAGCG TTTGGACGCG
ACCGTCCGCG CCATCCTGCG GGTTGGCGGC TTTGAGCTTC TTTATCGCAA GGATGTGCCG
GCGCGTGTGG TGATCGACGA GTATATCGAG GTCGCCAATG CCTTTTTCGA GGGGGCCGAG
CCCAAATTCA TCAATGCGGC CTTTGATCGC TGCGCACGTG GCGCCCGTCC GGACGAATTC
TAG
|
|---|
| Protein sequence | MATASKESPS ENRARLRRAA RLSAVQALYQ MEIGGLGASA VIREFREHRF GACGEAPEFV
EADEDFFESL VAGVVERQAD VDPAMDALLA DKWRLERLDA TVRAILRVGG FELLYRKDVP
ARVVIDEYIE VANAFFEGAE PKFINAAFDR CARGARPDEF
|
|---|
| |