| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1485 |
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| Symbol | |
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| ID | 4284542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 1627679 |
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| End bp | 1631197 |
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| Gene Length | 3519 bp |
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| Protein Length | 1172 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638140968 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_756715 |
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| Protein GI | 114570035 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.432425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGACTG AGACAACAAG CGGAGTTTCT GAGCTCGAAA TGATCGCCGC CGTTCACGGG
ACGGCGACCG TCTGCGGTGC GCCGGAAGGT CTGGACGCTC TGGTCTTTGC CGATACGGCG
CGCCTGCGTG GCGGCGTCAA TGTGTTCATT GCACGCGATG ATTCGCGGGC AGCGGCCTTT
GTCGCGGCGC TGCAGTTTTT CGCCCCCGAT ATTGAATTGC TGCGCCTGCC GGCCTGGGAC
TGCCAGCCCT ATGACCGGAT CTCGCCAAGC CCGCGCGTTG CCGCACGTCG GGCTGCGACA
CTTGCCAAGC TTGCCTCCGG TGAGTTGGGC CCGGCCACGC TGGTCGTCAC TACCGTCAAT
GCCATGGCGC AACGCTGCCC GCCGAGATCG GTGCTGCAGG ACTCCGGCCT GTCGATCCGG
CCGGGCGCCA GCGTCGATGT GGACGTGCTG GTCCGCCACT TCACCGCCAA CGGGTATTCG
CGCGCCGCAA CCGTCATGGA ACCGGGTGAT TTCGCGGTCA GGGGCGGGGT TGTCGATGTC
TATCCGCCCG GGGCGACCGA GCCGGTACGC CTTGATTTCT TCGGTGATAC GCTTGAATCG
ATCCGGGCCT TCGATCCGGA GACACAACGA TCCCTGCGCC AGATCAAGTC GATCGAGTTC
ACGCCGGTCA GCGAAGTCCT GCTCGACGAG GACAGCGTGT CCCGCTTCCG GTCCGGCTTC
GTGAAGACTT TTGGAGCGTC GCGCGGCACT GACCCGGTTT ATGAATCGGT CAGTGCGGGT
GCGCGGCCGG CGGGTGTCGA GCACTGGATG CCGCTCTTTT ATGAGCGTCT CGACACGCCG
TTCGACTATC TGCCGGACCA GAGCCTGATC GCCGTTGATC ACCTTGCCCA TGAAGCCCTC
GACGAGCGTC TGAGCCAGAT TGCCGACTAT TACGATTCGC GGATTGCAGC GGGCGAGACC
CGTCATGAAT CGGCCCTGTC GGCGCCGACC TATCGTGCCT TGCCGGCGGA CGCTCTTTAT
TTTGCCGACG GCGAATGGGA CACGGCTTTG GCGGACCGGC CAGTACGACG CTATACCGCT
TTCCGCGAAC CGGGCCCGCA AACCATTGAT GTCGCCGGCA AGCAGGGACG CGGTTTTGCC
GCCGAGCGTG CCGCCGAGAA CACCAATGTC TTTGACGCAG TGGCGGCTCA TATCAAGTCG
CTTTCGGCAT CGGGCAAGAC CGTCATGCTG GCTTCCTGGA CCGGCGGCGC GTCGGAACGC
CTGGCCAGCG TGCTGGGCGA TCACGGCATC TCTCGTATCC CCTTGCTCGA CAAATGGTCG
GATGTGCCCG CCGGCGGCAA GGGCGGCGTG TGCCGCGCCG TGCTGCCGCT CGAGCGGGGC
TTCGAAACCG ATACCCTGGC CGTGCTGTCG GAACAGGACA TTCTCGGTGA CCGCCTGGCC
CGTCCGCGCA AGAAGCGCAA ATCGGCCGAT ATCATCGTCG AGGCCGGCTC CCTGTCGCCC
GGCGATCTGG TCATCCATGC CGATCACGGG CTCGGCCGCT TCATCGGTCT GAAGACCCTG
CCGGTGCAGG ACGCGCCGCA TGATTGTATC GAGCTGGAAT ATTCCGGCCA GGCCAAGCTC
TACCTGCCGG TCGAGAATAT CGAGCTTTTG TCGCGCTATG GCGCCGAATC CGAAACCGCC
CAACTCGACA AGCTTGGCGG CGTGGCCTGG CAGGCGCGCA AGGCGAAAGC CAAGAAGCGC
CTGCGCGACA TGGCCGACCA GCTGATCAAG ATCGCGGCGG AACGCCTGGC CCGCAAGGCC
GAACCGATCG AGACGTCCAG CGGTGCCTTT GACGAATTCT GTTCGACCTT TCCCTATCCG
GAGACGGATG ACCAGCTGAA CGCCATCGAC GACGTGCTGA CCGACCTGGG TCGCGGTCGC
CCGATGGATC GTCTCATCTG CGGGGATGTC GGCTTCGGCA AGACCGAGGT TGCACTTCGG
GCCGCCTTTG TGGTTGCGCT CAGTGGCCAG CAGGTCGCGA TCGTGGCGCC GACAACCCTT
TTGGCGCGCC AGCATTTCAA GACGTTCAGC GACCGTTTCC GCGGCTGGCC GGTGAAAGTC
CGGCTGCTGT CGCGTCTGGT GACAGCCAAG GAAGCCAAGG CGACACGCGA CGAGTTGGCG
GCCGGCCAGG TCGAGATCGT GATCGGCACC CACGCGCTGC TGGCCAAGAC CGTGAAATTC
CGCGACCTCG GCTTGCTGGT GGTCGATGAG GAGCAGCATT TCGGCGTCAA GCACAAGGAA
CGTCTCAAGG AGCTGCGGTC CGACGTGCAT GTGCTCACCC TGACCGCGAC GCCCATTCCG
CGGACGCTGC AACTGGCCCT GACCGGCATT CGCGACCTGT CGATCATCGC CACACCGCCG
GTCGACCGCC TGGCCGTGCG CACCTATGTC GCGCCGTTCG ATCCGGTCAG TGTTCGCGAA
GCACTCCTGC GGGAGAAATA CCGGGGCGGG CAGGCCTTCT TTGTCGTGCC ACGGATCACC
GATCTGGAAG AAACCACCCG TTTCCTGCGC GAGAGCGTGC CGGAAGTGAG TTTCGTTGCC
GCGCATGGCC AGATGGCGGC GTCCCAGCTC GAGGACATCA TGACCGCCTT CTATGAGGGC
CGCTATGACG TCCTCCTGTC GACGACGATC GTGGAGTCCG GCATCGACAT CCCGACTGCC
AACACGCTGA TTATCCATCG GGCTGACCGG TTCGGCCTGT CCCAGCTTTA TCAGCTGCGC
GGCCGGGTCG GACGCTCCAA GACGCGGGCC TATGCCTATC TGACAACGCC GATGCGCCAG
AAGATCACCG AGAGCGCTGA AAAGCGCCTG AAGGTGATGC AGTCGCTGGA CTCGCTGGGT
GCCGGTTTCA CGCTGGCCTC CCACGATCTC GATCTGCGTG GCGGCGGCAA TCTGCTGGGC
GAAGAACAGT CCGGTCATAT CCGTGATGTC GGCGTCGAGC TCTATCAATC CATGCTGGAA
GAGGCGGTCG CCTCCCTGCG CTCTGGTGGC GATGAGCTTG AGGAGGGCGA TTGGTCGCCG
CAGATCAATG CCGGCGGGGC GGTGTTGATC CCGGATCATT ATGTTCCGGA CCTTGATGTC
CGCCTGCAGC TGTACCGGCG CCTGTCATCC CTGGACAACA AGACCGAACG TGAAGGCTAT
GCCGCCGAAC TCATCGACCG TTTCGGCCCC CTGCCCAAGG AAGTCGAGAC ACTGCTGCGA
GTCGTGGCGG TCAAGGCGCT GTGCAAGAAG GCCGGGATCG AGAAAGTCGA TGCCGGTCCC
AAGGGCGCGG TCATCCACTT GCGCAATGAC CGTTTCGCCG ATCCGGCCGG TCTGGTGGCG
CACATCTCCG CCAATCCGGC CCTGTTCAAG GTCCGACCGG ATCTCAAACT GGTGCTGCGG
GCCGAATGGG ATGAGCCGGA GGATCGCCTG CGCGCCATCG AGCGAGCCAT TGCGCCACTG
GCCGAGATGG CCGTGAAAGC CAAACAGTTG GAAGCCTGA
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| Protein sequence | MATETTSGVS ELEMIAAVHG TATVCGAPEG LDALVFADTA RLRGGVNVFI ARDDSRAAAF
VAALQFFAPD IELLRLPAWD CQPYDRISPS PRVAARRAAT LAKLASGELG PATLVVTTVN
AMAQRCPPRS VLQDSGLSIR PGASVDVDVL VRHFTANGYS RAATVMEPGD FAVRGGVVDV
YPPGATEPVR LDFFGDTLES IRAFDPETQR SLRQIKSIEF TPVSEVLLDE DSVSRFRSGF
VKTFGASRGT DPVYESVSAG ARPAGVEHWM PLFYERLDTP FDYLPDQSLI AVDHLAHEAL
DERLSQIADY YDSRIAAGET RHESALSAPT YRALPADALY FADGEWDTAL ADRPVRRYTA
FREPGPQTID VAGKQGRGFA AERAAENTNV FDAVAAHIKS LSASGKTVML ASWTGGASER
LASVLGDHGI SRIPLLDKWS DVPAGGKGGV CRAVLPLERG FETDTLAVLS EQDILGDRLA
RPRKKRKSAD IIVEAGSLSP GDLVIHADHG LGRFIGLKTL PVQDAPHDCI ELEYSGQAKL
YLPVENIELL SRYGAESETA QLDKLGGVAW QARKAKAKKR LRDMADQLIK IAAERLARKA
EPIETSSGAF DEFCSTFPYP ETDDQLNAID DVLTDLGRGR PMDRLICGDV GFGKTEVALR
AAFVVALSGQ QVAIVAPTTL LARQHFKTFS DRFRGWPVKV RLLSRLVTAK EAKATRDELA
AGQVEIVIGT HALLAKTVKF RDLGLLVVDE EQHFGVKHKE RLKELRSDVH VLTLTATPIP
RTLQLALTGI RDLSIIATPP VDRLAVRTYV APFDPVSVRE ALLREKYRGG QAFFVVPRIT
DLEETTRFLR ESVPEVSFVA AHGQMAASQL EDIMTAFYEG RYDVLLSTTI VESGIDIPTA
NTLIIHRADR FGLSQLYQLR GRVGRSKTRA YAYLTTPMRQ KITESAEKRL KVMQSLDSLG
AGFTLASHDL DLRGGGNLLG EEQSGHIRDV GVELYQSMLE EAVASLRSGG DELEEGDWSP
QINAGGAVLI PDHYVPDLDV RLQLYRRLSS LDNKTEREGY AAELIDRFGP LPKEVETLLR
VVAVKALCKK AGIEKVDAGP KGAVIHLRND RFADPAGLVA HISANPALFK VRPDLKLVLR
AEWDEPEDRL RAIERAIAPL AEMAVKAKQL EA
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