| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1461 |
|---|
| Symbol | |
|---|
| ID | 4284571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1603083 |
|---|
| End bp | 1603811 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 638140944 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_756691 |
|---|
| Protein GI | 114570011 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0083992 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0205194 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGTA TGCTCCTGTC CTGCTTGTGT GTTTCCATCC TGTCGGCCAG CCCGGCCGGT
GCCGATGGAC CGATCCGCTG GCACAGTGAA AATGTTCAGA TTCTAAAGGG CTTGAACTAT
GAACTTGGCC CTGAGGAACG CACCATCATC ACTGTGGAAC ATGCTCATAC ATCCGACATC
GGGGACCTGT TCCTGTTCAC CGATTTTACG TTTGAGCCGG ATGGCGACAT CCAGGCCTAT
GGCGAGATCA CGCCGCGCCT TTCGCTGTCA CGCCTGACGG GGCGGGATTG GCGCGCGGGC
GTTTTCAGCG ATGTCTTGCT CGCTGCCAAT TACGAGCGCG GTGAGGGCGG GGTCGAGCGC
TACCTCGCAG GTGCCGCTAT CGACCTCGAC ATTGAAGGGT TTCGGTTTGT GCGTGTGCAC
GCTTTCCTGC GGGATGATCC AAGTCGATCC GGGACCACAG GGCAGCTGTC GATTGCCTGG
AACCGACCCT TTGAAATCGG CGGGGAAGCC TTTCTCGCTG AAGGATTTGC GGACCTGGCC
GGGGCCGAGG GCAATGGCGT CGCAAATCAG TTATTGGTTC CCCGATTATT GTGGGATATA
GGCGCGCACC ACGGTGCCGC AGGCCGCGTT TATCTGGGTC TGGAATGGCA GTACTGGCAC
AACAAGTTCG GCGTGGACGG CGTCACTGAA TCCGTACCCC AGATCCAATT GAAATGGGTG
CTCCACTAG
|
|---|
| Protein sequence | MSRMLLSCLC VSILSASPAG ADGPIRWHSE NVQILKGLNY ELGPEERTII TVEHAHTSDI
GDLFLFTDFT FEPDGDIQAY GEITPRLSLS RLTGRDWRAG VFSDVLLAAN YERGEGGVER
YLAGAAIDLD IEGFRFVRVH AFLRDDPSRS GTTGQLSIAW NRPFEIGGEA FLAEGFADLA
GAEGNGVANQ LLVPRLLWDI GAHHGAAGRV YLGLEWQYWH NKFGVDGVTE SVPQIQLKWV
LH
|
|---|
| |