| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1452 |
|---|
| Symbol | |
|---|
| ID | 4285031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1592478 |
|---|
| End bp | 1593260 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638140934 |
|---|
| Product | Sec-independent protein translocase TatD |
|---|
| Protein accession | YP_756682 |
|---|
| Protein GI | 114570002 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.350253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.000933901 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGTCG ACAGTCACGT CAATCTTCAC GGCGAGCAAT TCGCCGAGGA TCTCGATCAG
GTCATCGACC GGGCTCGCGC GGCCGGCGTC GGCCGCATGA TCACCATTTG TTGTCGACTG
TCTGATTTCG ATGATGTTTC CAGTATCGCA GAGCGGCATG ACGACATCTG GTGCACAATC
GGCGCGCACC CCCATCATGC CAAGGATCGG CCGGACATCA CCGCCGACGA ACTCATTGAA
ATCGCGCAGC ATCCCAAAGT CGTCGGGATT GGTGAGACGG GTCTGGACTT CCATTACGGG
TATTCGCCGC GTGACGAACA ATTCCGCTCC TTGCTGGCCC ATGTGGACGC TGCCCGGCGC
ACGGACCTGC CGCTGATCCT GCATACACGC GACGCCGATG ACGCCATGGC AGATCTGCTT
GAGGATGAGA TGGGGAAGGG GGCCTTCCGG CCGCTCCTCC ATTGCTATAC AGGCGGTTCG
GTGCTGGCCA GGCGGGCCTC GAAACTCGGC GCCTATTTCG CAGCGTCCGG CATTATTACC
TTCAAGAAGG CTGAGGATGT CAGGGCTGTT TTCCGCGATG ACGTGGCCGA TGACCGGGTG
ATCGTCGAGA CAGATTGCCC GTATCTGGCA CCGGTTCCGC ATCGGGGGCG TCGTTGCGAG
CCGTCATTCC TGCCGGATGT TGCGCGTGGC CTTGCCGCAG TAAAAGGCTG GACCGACCAA
GAGTGCGCCG ACATCACGAC GCAGAATTTT TTCCGCCTGT TTGACCGGGT CTCGCGCTCG
TGA
|
|---|
| Protein sequence | MWVDSHVNLH GEQFAEDLDQ VIDRARAAGV GRMITICCRL SDFDDVSSIA ERHDDIWCTI
GAHPHHAKDR PDITADELIE IAQHPKVVGI GETGLDFHYG YSPRDEQFRS LLAHVDAARR
TDLPLILHTR DADDAMADLL EDEMGKGAFR PLLHCYTGGS VLARRASKLG AYFAASGIIT
FKKAEDVRAV FRDDVADDRV IVETDCPYLA PVPHRGRRCE PSFLPDVARG LAAVKGWTDQ
ECADITTQNF FRLFDRVSRS
|
|---|
| |