Gene Mmar10_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1425 
Symbol 
ID4285664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1560243 
End bp1561643 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content62% 
IMG OID638140907 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_756655 
Protein GI114569975 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.197772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000000283985 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCAG GCGCTTTCGA CGTGATCGTG ATCGGTGGAG GCCCCGGTGG CTATGTGGCA 
GCGATCCGCG CCGCGCAGCT GGGTTTCAAG ACGGCCGTCG TGGAGCGCGA CAATCTCGGT
GGCATCTGCC TCAACTGGGG CTGTATCCCG ACCAAGGCGC TGCTGCGTTC GGCCGAAGTC
TACCACCTCA TGCAGAACGC GGCTGATTTC GGTCTCTCGG CCGAGAAGAT CGGCTTCGAC
ATCGAGGCTA TCGTGCAGCG CTCCCGCAAG GTCTCGTCGC GCCTGACTGG CGGCATCGGC
ATGCTGATGA AGAAGCACAA GATCACGGTG ATTGAAGGCT CAGCCGCGCT GGACAGGGGC
AAGGATGCCC CCACGGTCGT CGTCGGCAAG GACCGCTACA CCGCCAAGCA TGTCATCCTG
GCCACCGGCG CCCGTGCCCG CACCATCCCG CAGGCCGGCC TCGAACCGGA TGGCGACAAG
ATCTGGACCT ATCGCGAGGC CATGGTGCCG ACCGAAATGC CCAAATCCCT GCTGGTCATC
GGTTCCGGCG CCATCGGTAT CGAGTTCGCC AGCTTCTACC GCACAATGGG TGCCGAGGTG
ACGGTGGTCG AGATGATGGA CCGCGTCCTG CCGGTCGAAG ACGAGGAAAT CTCGGCCTTC
GCGGCCAAGA GCTTCAAGAA ACAGGGCCTG AAGCTGAAGG TTTCGGCCCA GGTCGAGAAG
CTGGAGAAGA CGGCCAAAAC TGTGAAGGTC CACGTCAAGG ACGCCAAGGG CAAGGTCGAG
ATTGTCGAGG TCGAGAAAGT CATCATGGCT GTCGGCATTG CCGCCAATAT CGAGAATATG
GGCCTGGAAG CGCTGGGCGT GAAGATTGAT CGCGGCCATG TGGTCAATGA CGGTTTCGGG
CGTACCAATG TCAAAGGCCT CTACGCCATT GGCGATGTCG CCGGTCCGCC CTGGCTGGCG
CACAAGGCGT CGCACGAAGG CGTTGTCTGC ATCGAGAAAA TCGCCGGCGA GAATGTCCAC
GCCTTCGAGA CCGGCAATAT CCCGGGCTGT ACCTATTGCC ATCCGCAGAT CGCCTCTGTC
GGCCTGACCG AGGCCAAGGC CAAGGCCGCC GGACATGAGA TCAAGGTCGG CCGCTTTCCC
TTTGTCGGCA ATGGCAAGGC GATCGCGCTG GGTGATGACC AGGGCCTGGT CAAAACCGTC
TTTGATGCCA AGACGGGTGA ACTCCTGGGC GCCCATATGG TCGGCCCGGA AGTGACCGAG
ATGATCCAGG GCTATGTCGT CGGGCGGCAG CTGGAGACCA CAGAGGCGGA ACTCATGCAC
ACGGTTTTCC CGCATCCGAC CCTGTCGGAA ATGATGCATG AAAGCGTTCT CGACGCCTAC
GGACGCGCCC TCCACATTTG A
 
Protein sequence
MSAGAFDVIV IGGGPGGYVA AIRAAQLGFK TAVVERDNLG GICLNWGCIP TKALLRSAEV 
YHLMQNAADF GLSAEKIGFD IEAIVQRSRK VSSRLTGGIG MLMKKHKITV IEGSAALDRG
KDAPTVVVGK DRYTAKHVIL ATGARARTIP QAGLEPDGDK IWTYREAMVP TEMPKSLLVI
GSGAIGIEFA SFYRTMGAEV TVVEMMDRVL PVEDEEISAF AAKSFKKQGL KLKVSAQVEK
LEKTAKTVKV HVKDAKGKVE IVEVEKVIMA VGIAANIENM GLEALGVKID RGHVVNDGFG
RTNVKGLYAI GDVAGPPWLA HKASHEGVVC IEKIAGENVH AFETGNIPGC TYCHPQIASV
GLTEAKAKAA GHEIKVGRFP FVGNGKAIAL GDDQGLVKTV FDAKTGELLG AHMVGPEVTE
MIQGYVVGRQ LETTEAELMH TVFPHPTLSE MMHESVLDAY GRALHI