| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1399 |
|---|
| Symbol | |
|---|
| ID | 4284631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1534343 |
|---|
| End bp | 1535149 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638140881 |
|---|
| Product | indole-3-glycerol phosphate synthase |
|---|
| Protein accession | YP_756629 |
|---|
| Protein GI | 114569949 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.105391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.00077331 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACC CGCCCGACAC CCTCGCCCGC ATCGGGGCCT ACAAGCTCGA CCATATCGCG
GCCTGCAAGT CCGCCCGGCC CTATGCCGAG ATCGCCGCCG CCGCTCGGGA GGCCTCACCG
GTGCGCGGCT TTACGAGCGC CCTCGCCGCC GCTCCCGGCG GTCTGGGTCT CATCGCCGAG
ATCAAGAAAG CCAGCCCCTC CAAGGGGCTG ATCCGTGCCG ATTTTGATCC GCCCGCCCTG
GCAAGGGCCT ATGAGGCCGG CGGCGCCAAC TGTCTGTCAG TGCTCACCGA TACACCCAGC
TTCCAGGGAG CCGACGCCTT CCTGACCGCG GCCCGTGAGG CCGTCTCCAT TCCGGCCCTG
CGCAAGGATT TCATGTATGA CCGCTACCAG GTCGCCGAAG CCCGCCTTCT GGGCGCCGAC
GCGATCCTGG TGATCATGGC GGCCATCGAC GACGCCACGG CCCGCGATCT GATCGAGGAG
GCCGCATTAT GGTCGATGGA CGTGCTGGTC GAGGTTCATG ATGCCCCCGA AATGGAGCGG
GCCCTGCAGC TCGATGCGCC GCTGATCGGG ATCAACAATC GCAATCTGCG AACCTTCGAG
ACCTCGCTCG ACACGTTCGA CGCCCTCGCC CCGATGGTGG GCGGTGACAG GCTGCTGGTC
GCCGAGAGTG GCATTTTCGG CCCGGACGAT GCCCGTCGTG TCCAGGCTGC CGGTGCGCGG
GCGCTGCTGG TCGGTGAAAG CCTGATGCGG CAGGACGACG TCACCACGGC CACGCGGGCA
CTCATGGGAC CATCCGGACC TGCTTGA
|
|---|
| Protein sequence | MTNPPDTLAR IGAYKLDHIA ACKSARPYAE IAAAAREASP VRGFTSALAA APGGLGLIAE
IKKASPSKGL IRADFDPPAL ARAYEAGGAN CLSVLTDTPS FQGADAFLTA AREAVSIPAL
RKDFMYDRYQ VAEARLLGAD AILVIMAAID DATARDLIEE AALWSMDVLV EVHDAPEMER
ALQLDAPLIG INNRNLRTFE TSLDTFDALA PMVGGDRLLV AESGIFGPDD ARRVQAAGAR
ALLVGESLMR QDDVTTATRA LMGPSGPA
|
|---|
| |