Gene Mmar10_1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1384 
Symbol 
ID4286016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1516386 
End bp1517123 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content64% 
IMG OID638140866 
Productundecaprenyl pyrophosphate synthetase 
Protein accessionYP_756614 
Protein GI114569934 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.380687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0459529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG ACGCTTCCGC AGACCGACCG GAGCCGCGCC ATACGGCCAT CATCATGGAC 
GGCAATGGTC GCTGGGCGAA GGCCCGCGGC CGTCCGCGCT CCTTTGGCCA CAAGCGCGGT
GTCGAAACGG TCCGCAAGAT TGTCGAACAT GCCGGCGAGC TCGGCGTGCG CTATCTGACC
CTGTTCTCCT TCTCGACCGA GAATTGGAGC CGTCCGGCCG ATGAGGTCGG GGCGCTGTTC
GAACTGCTCA AACACTATGT CGAAGCGGAC CTGGAGGGGC TGGCCAGGCG TGGTGTGCGG
ATCCGCATCA TCGGTCGACG TGACAATCTC GGTGCCGACC TGATCGCCAT TATTGACCGG
GCCGAGGCGC GTACCCGGGA CAATACCGAC TTCCACCTGA CCATCGCCTT CAACTATGGC
GGGCGGGACG AAATCCTGCG TGCCTGCCAG GCGGTGGCAA AGGAGGCGGC ATCAGGGGCC
CTGGATGTGT CGACGCTCGA CGAGGCGCGC CTTGGCGGCT TCCTCGATAC TGAAGGCCTG
CCGGATGTGG ACCTGATGAT CCGCACCAGT GGCGAGCAAC GCATCTCCAA CTTCCTGCTC
TGGCAAGCGG CCTATGCCGA ACTTGTCTTC GTCGAGGCAC TCTGGCCCGA TTTCACCACT
GACGATCTGG CGAGCGCCAT CAACACCTAT CACCAGCGTG TCAGGCGCTA TGGAGGCGTT
GATGCCGGCG CCGCGTGA
 
Protein sequence
MTDDASADRP EPRHTAIIMD GNGRWAKARG RPRSFGHKRG VETVRKIVEH AGELGVRYLT 
LFSFSTENWS RPADEVGALF ELLKHYVEAD LEGLARRGVR IRIIGRRDNL GADLIAIIDR
AEARTRDNTD FHLTIAFNYG GRDEILRACQ AVAKEAASGA LDVSTLDEAR LGGFLDTEGL
PDVDLMIRTS GEQRISNFLL WQAAYAELVF VEALWPDFTT DDLASAINTY HQRVRRYGGV
DAGAA