Gene Mmar10_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1339 
SymbolclpX 
ID4284659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1467762 
End bp1469033 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content59% 
IMG OID638140819 
ProductATP-dependent protease ATP-binding subunit ClpX 
Protein accessionYP_756569 
Protein GI114569889 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.205496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.122172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGA CGACGGGCGG AGACAGCGAG TCGAAGAACA CCCTCTACTG CTCTTTTTGC 
GGAAAGAGCC AGCATGAGGT TCGCAAACTG ATCGCCGGCC CCACGGTGTT CATCTGTGAT
GAATGCGTCG AGCTCTGCAT GGATATCATC CGCGAGGAAA ACAAATCCTC GCTGGTCAAA
TCCAAGGAAG GCGTTCCGTC TCCGCAGGAG ATTTTCAACG TCCTCAATGA TTATGTGATC
GGCCAGGCGC ATGCCAAGCG CGTGCTCGCC GTGGCGGTCC ACAATCACTA CAAGCGGCTC
AACCATGCAT CGCAGAATTC CGACGTGGAG CTCGCCAAGT CCAACATCCT GCTGATCGGA
CCGACCGGTT GCGGCAAGAC GCTGCTTGCG CAGACGCTGG CCCGCATCCT CGATGTGCCG
TTCACGATGG CGGATGCCAC GACGCTGACC GAAGCCGGTT ATGTCGGCGA GGATGTCGAG
AACATCGTTC TGAAGTTGCT CCAGGCCGCC GATTACAATG TCGAGCGGGC CCAGCGCGGC
ATTGTCTATA TCGATGAAAT CGACAAGATT TCGCGCAAGT CGGACAATCC CTCCATCACC
CGCGACGTGT CGGGCGAGGG TGTCCAGCAG GCGCTTTTGA AGATCATGGA AGGCACGGTT
GCCTCTGTGC CGCCTCAGGG TGGTCGCAAA CATCCGCAGC AGGAATTCCT GCAGGTGGAC
ACGACCAATA TCCTGTTTGT CGTCGGCGGT GCCTTTGCCG GTCTCGACAA GGTCATTTCC
CAGCGCGGCC AGGGGTCCTC GATCGGGTTT GGCGCCGATG TGCGTGAGCC GGATGCCCGT
CGCACCGGTG AGATCCTGCG CGAAGTCGAG CCGGACGATC TGCTGCGCTT CGGCCTGATC
CCGGAATTCG TGGGTCGTCT GCCGGTCATT GCGACCCTTG AAGACCTTGA TATCGGCGCC
CTGGTCCAGA TTCTGACCGA GCCGAAAAAC GCTCTGGTCA AGCAGTATCA GCGACTGTTC
GAGATGGAAG GCGTCGGCCT GACCTTCACC GAAGATGCGC TCAAGGCGAT CGCCAATCGC
GCCATTGCCC GCAAGACCGG TGCCCGCGGC CTGCGCTCGA TCATGGAGGG CATTCTGCTC
GAAACCATGT TCGATCTGCC AAGTCTGGAA GGCGTGGAAG AGATCGTCGT CAATGGCGAA
GTGGTTGATG GCAATGCCAA ACCGCTGTCC ATCTATGCAG AGCGCAAGGA CGACAAGCGG
GAGGGCGCTT GA
 
Protein sequence
MSKTTGGDSE SKNTLYCSFC GKSQHEVRKL IAGPTVFICD ECVELCMDII REENKSSLVK 
SKEGVPSPQE IFNVLNDYVI GQAHAKRVLA VAVHNHYKRL NHASQNSDVE LAKSNILLIG
PTGCGKTLLA QTLARILDVP FTMADATTLT EAGYVGEDVE NIVLKLLQAA DYNVERAQRG
IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKIMEGTV ASVPPQGGRK HPQQEFLQVD
TTNILFVVGG AFAGLDKVIS QRGQGSSIGF GADVREPDAR RTGEILREVE PDDLLRFGLI
PEFVGRLPVI ATLEDLDIGA LVQILTEPKN ALVKQYQRLF EMEGVGLTFT EDALKAIANR
AIARKTGARG LRSIMEGILL ETMFDLPSLE GVEEIVVNGE VVDGNAKPLS IYAERKDDKR
EGA