Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1339 |
Symbol | clpX |
ID | 4284659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 1467762 |
End bp | 1469033 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638140819 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_756569 |
Protein GI | 114569889 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.205496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.122172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGA CGACGGGCGG AGACAGCGAG TCGAAGAACA CCCTCTACTG CTCTTTTTGC GGAAAGAGCC AGCATGAGGT TCGCAAACTG ATCGCCGGCC CCACGGTGTT CATCTGTGAT GAATGCGTCG AGCTCTGCAT GGATATCATC CGCGAGGAAA ACAAATCCTC GCTGGTCAAA TCCAAGGAAG GCGTTCCGTC TCCGCAGGAG ATTTTCAACG TCCTCAATGA TTATGTGATC GGCCAGGCGC ATGCCAAGCG CGTGCTCGCC GTGGCGGTCC ACAATCACTA CAAGCGGCTC AACCATGCAT CGCAGAATTC CGACGTGGAG CTCGCCAAGT CCAACATCCT GCTGATCGGA CCGACCGGTT GCGGCAAGAC GCTGCTTGCG CAGACGCTGG CCCGCATCCT CGATGTGCCG TTCACGATGG CGGATGCCAC GACGCTGACC GAAGCCGGTT ATGTCGGCGA GGATGTCGAG AACATCGTTC TGAAGTTGCT CCAGGCCGCC GATTACAATG TCGAGCGGGC CCAGCGCGGC ATTGTCTATA TCGATGAAAT CGACAAGATT TCGCGCAAGT CGGACAATCC CTCCATCACC CGCGACGTGT CGGGCGAGGG TGTCCAGCAG GCGCTTTTGA AGATCATGGA AGGCACGGTT GCCTCTGTGC CGCCTCAGGG TGGTCGCAAA CATCCGCAGC AGGAATTCCT GCAGGTGGAC ACGACCAATA TCCTGTTTGT CGTCGGCGGT GCCTTTGCCG GTCTCGACAA GGTCATTTCC CAGCGCGGCC AGGGGTCCTC GATCGGGTTT GGCGCCGATG TGCGTGAGCC GGATGCCCGT CGCACCGGTG AGATCCTGCG CGAAGTCGAG CCGGACGATC TGCTGCGCTT CGGCCTGATC CCGGAATTCG TGGGTCGTCT GCCGGTCATT GCGACCCTTG AAGACCTTGA TATCGGCGCC CTGGTCCAGA TTCTGACCGA GCCGAAAAAC GCTCTGGTCA AGCAGTATCA GCGACTGTTC GAGATGGAAG GCGTCGGCCT GACCTTCACC GAAGATGCGC TCAAGGCGAT CGCCAATCGC GCCATTGCCC GCAAGACCGG TGCCCGCGGC CTGCGCTCGA TCATGGAGGG CATTCTGCTC GAAACCATGT TCGATCTGCC AAGTCTGGAA GGCGTGGAAG AGATCGTCGT CAATGGCGAA GTGGTTGATG GCAATGCCAA ACCGCTGTCC ATCTATGCAG AGCGCAAGGA CGACAAGCGG GAGGGCGCTT GA
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Protein sequence | MSKTTGGDSE SKNTLYCSFC GKSQHEVRKL IAGPTVFICD ECVELCMDII REENKSSLVK SKEGVPSPQE IFNVLNDYVI GQAHAKRVLA VAVHNHYKRL NHASQNSDVE LAKSNILLIG PTGCGKTLLA QTLARILDVP FTMADATTLT EAGYVGEDVE NIVLKLLQAA DYNVERAQRG IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKIMEGTV ASVPPQGGRK HPQQEFLQVD TTNILFVVGG AFAGLDKVIS QRGQGSSIGF GADVREPDAR RTGEILREVE PDDLLRFGLI PEFVGRLPVI ATLEDLDIGA LVQILTEPKN ALVKQYQRLF EMEGVGLTFT EDALKAIANR AIARKTGARG LRSIMEGILL ETMFDLPSLE GVEEIVVNGE VVDGNAKPLS IYAERKDDKR EGA
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