| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1332 |
|---|
| Symbol | |
|---|
| ID | 4286901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1457273 |
|---|
| End bp | 1458703 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638140811 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_756562 |
|---|
| Protein GI | 114569882 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.977936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.520853 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGAG CGGGGCGCGC GGTTGCGAAT GCGATTCGGG CCCGCTGGGC GCCTGTCCCT
GTCTTGGTGC TGGCCGGGCC GGGCAATAAT GGTGGCGATG GGCTGGTCGC CGCGCGGGTC
CTGCGCGAAG CGGGCTGGCC TGTACGCGTG ATGTTGCTGG CAGCGCGGGA AGGTCTTTCG
ACAGACGCAG CCAGAGCGTT GGAGGGATGG GGCGGCCTGG TTGAGTCCCC AGCCTCGGGA
TTTTTGGGGG ATGCAGCGCT CGTGATCGAC GCCCTGTTCG GCGCAGGTTT GTCGAGACCT
GTCGAGGGAA GCGCGGCAGA TTGGCTGGTC CGAATTCGTG ATAGTGGCCT GCCGGTGGTC
TCAGTCGACT TGCCCAGCGG GATAAACGGG GATGCGCGCC CCTTGGCAGC GCCCCACCTG
ACGGCCGATC TGACAATCAC CTTTCATTGC AGAAAGCTGG CGCACCTGGT TGAGCCTTTT
GCGGAAATGT GTGGTGAAAC TGTCTGTGTC GATATTGGTA TCCCGGACGG TTGGGAAGCC
CGGGTAACGC CAGTGGCGCG AGAGGTCGAC AATCCCGACT GGAAACCGGT CGAGCCCTCC
GGATATCTCA GCTTGCACAA ACATGCTCGC GGCCGCGTGG CGGTGTTCAG TGGGGGCAGC
CAGTCCTCAG GCGCCGGGCG TCTGGCAGCG GCCGGCGCGC TACGCGCCGG CGCCGGCGTG
GTGACACTTT GTACGCCGCC CTCGGCCAGC CTGGTCAATG CGGCGCATCT GACCGCCATC
ATGCTGGCCA GGTGGGGTAG TGACGATCAG ATTGGTGAAG TACTGACCGG CTTGCGTGCC
GAGGCTGCCG TCCTGGGGCC GGCCCTGGGT GTTGGTCCGG CCACGCGCAA AGCCGTGCTG
GGTGCCCTGG AGGCCAATGT CCCTCTGGTC CTCGATGCGG ATGCTTTGAC CAGTTTTGCC
GACGATGCGG ATAGTCTTGT CGACCAATTG CATGATCGGT GCGTCCTGAC ACCGCATCAT
GGCGAGTTTT CCAGGTTGTT CGGGGAGGGC AGACCGAACT GGAACAAGCT CGAGCAAGCC
CAGTCTGCGG CGGACCGGTG TGGCTGCACG GTGTTGCTCA AAGGTCCGGC GACCATCATC
GCAACGCCGG GGCTGACACC ATGGATAAAC CGACATGCCT GCCGCTGGCT GGCCACGGCG
GGGAGCGGGG ATGTCCTGGC CGGCATCATT GCGGCAGGAC TGGCGGCGGG CATGTCGCCG
CATGACGCGG CGGCCGGCGC GACCTGGCTG CACGGAGATG CCGCCTTGCG CCAGGGGGCA
GGAATGACCG CCGAGGACCT TCCCGACGCC TTGCCAGGCG CGCTGCAAGC CCTGCAACGA
CGAAGGCGCC AAACGGCAGC GCTGAGCCAT CTCCTGTCGC ATGGAAGCTA G
|
|---|
| Protein sequence | MDRAGRAVAN AIRARWAPVP VLVLAGPGNN GGDGLVAARV LREAGWPVRV MLLAAREGLS
TDAARALEGW GGLVESPASG FLGDAALVID ALFGAGLSRP VEGSAADWLV RIRDSGLPVV
SVDLPSGING DARPLAAPHL TADLTITFHC RKLAHLVEPF AEMCGETVCV DIGIPDGWEA
RVTPVAREVD NPDWKPVEPS GYLSLHKHAR GRVAVFSGGS QSSGAGRLAA AGALRAGAGV
VTLCTPPSAS LVNAAHLTAI MLARWGSDDQ IGEVLTGLRA EAAVLGPALG VGPATRKAVL
GALEANVPLV LDADALTSFA DDADSLVDQL HDRCVLTPHH GEFSRLFGEG RPNWNKLEQA
QSAADRCGCT VLLKGPATII ATPGLTPWIN RHACRWLATA GSGDVLAGII AAGLAAGMSP
HDAAAGATWL HGDAALRQGA GMTAEDLPDA LPGALQALQR RRRQTAALSH LLSHGS
|
|---|
| |