| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1324 |
|---|
| Symbol | |
|---|
| ID | 4286893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1442552 |
|---|
| End bp | 1444048 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638140803 |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_756554 |
|---|
| Protein GI | 114569874 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.695587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.349427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTCG CAGAACTGGG TCTGAGCCCA AAACTACTCG AAGCCATCCA AGAGGCTGGC
TATAGCGAAC CGACCCCGAT CCAGGCCGGC GCCATTCCTG CGGCGCTTGC CGGGCGCGAC
GTGCTTGGCA TTGCCCAAAC CGGTACCGGC AAGACGGCCT CCTTCACGCT GCCACTGATC
GAGCGCCTGT CGCGTGGCCG GGCGAAGGCC CGCATGCCTC GCTCCCTGAT CATTGCACCG
ACGCGCGAAC TGGCGGCCCA GTGTGCCGAG AATTTCGAAA CCTATTCCAA GGGCCAGAAA
CTCTCGATGG CCCTGCTGAT CGGCGGCGTG GCCTTTGGAC CGCAGGAAGA AATCCTCAAT
AAGGGCGCCG ACGTCCTGAT CGCGACCCCC GGTCGCCTGC TCGATCATTT CGGCCGTGGC
AAACTCCTGA TGACCGGCGT TCAGATGCTG GTGGTCGATG AGGCCGACCG CATGCTGGAC
ATGGGCTTCA TCCCGGATCT CGAGAAAATC TTCTCGCTGG TGCCGCCGGC TCCGCGACGC
CAGACCCTGT TCTTCTCGGC CACGATGCCG AAGGAAATCC AGAGCCTGGT CGACCGTTTC
CTGCGCGATC CCGAGCGTGT CGAAGTCTCC CGCCCGGCCC AGACCGGCGC CAATATCACA
CAGCTGATGA TCCGCCTGAC AGACAATTCG GCGAAGGCCA AACGCCTCGC CCTGCGTCAG
GCGATGTCAC GCGAAGGCGT GAAAAACGGT ATCATCTTCT CCAATCGCAA ACGCGATGTC
GACGTTGTGG CCCGCTCGCT CCAGCGCCAC GGTTTTTCAG CTGCGCCCAT CCATGGCGAT
CTCGATCAAT CGGCCCGCAC AGCAACGCTC GCCGACTTCA AGGCCGGCAC ACTCCGCTTC
CTGGTGGCCA GCGATGTGGC CGCACGCGGT CTCGACATTC CCGATGTCAG CCACGTCTTC
AACTACGACA TGCCCCACCA TGCCGATGAT TATGTGCACC GGATTGGCCG CACCGGGCGC
GCCGGCAAAT CCGGTGAATC GGTCACGATT TTTGCGCCGG GCGATGAAAA ATCACTCGCC
GCGGTGCTGA AGCTCATCAA GGAAGAGATT CCGGAGCTGG TTCTGGACGG CAATGGCGAC
GCGCCGGCGT CCAAAGCGTC GTCACCCGAC GCCAAGTCAG AAGCGGCTGC GCCAAAAACA
GCGTCGACAC GGACACGCAC AAGAAAGCCA CGCGTTTCTC GCAAATCCGC TGAGGCCGAA
GCCCCGCCGA AAACCCCTTC TCCGGCCGCT GAGCCAGAAA CTGCGGACGC CGCAATCGTG
GACACCGCCC CGGTCAAGCA GGCTCAGGAC ACTGAAACGG CTCGTGAAAA CACATCTCCC
AGCAAGCGGC AATCAAACCG CCGGTCCGGG TCGAAGCGCG ACCGAGGTCA GGACAAAGAA
CGTTCGACCA TCGGTTTTGG CGACCATGTC CCCAGTTTTA TGAACGCAGA TCGGTAA
|
|---|
| Protein sequence | MTFAELGLSP KLLEAIQEAG YSEPTPIQAG AIPAALAGRD VLGIAQTGTG KTASFTLPLI
ERLSRGRAKA RMPRSLIIAP TRELAAQCAE NFETYSKGQK LSMALLIGGV AFGPQEEILN
KGADVLIATP GRLLDHFGRG KLLMTGVQML VVDEADRMLD MGFIPDLEKI FSLVPPAPRR
QTLFFSATMP KEIQSLVDRF LRDPERVEVS RPAQTGANIT QLMIRLTDNS AKAKRLALRQ
AMSREGVKNG IIFSNRKRDV DVVARSLQRH GFSAAPIHGD LDQSARTATL ADFKAGTLRF
LVASDVAARG LDIPDVSHVF NYDMPHHADD YVHRIGRTGR AGKSGESVTI FAPGDEKSLA
AVLKLIKEEI PELVLDGNGD APASKASSPD AKSEAAAPKT ASTRTRTRKP RVSRKSAEAE
APPKTPSPAA EPETADAAIV DTAPVKQAQD TETARENTSP SKRQSNRRSG SKRDRGQDKE
RSTIGFGDHV PSFMNADR
|
|---|
| |