Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1323 |
Symbol | |
ID | 4286892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1441345 |
End bp | 1442397 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638140802 |
Product | diguanylate cyclase |
Protein accession | YP_756553 |
Protein GI | 114569873 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.134516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.420197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGGTC GACTGCTTGG CAAAGAAGGA CGTGAGTTCG CGCTCAAGGC GCTGGATCTC ATGGATCAAT TCGGCGTAGC GCCGACCCCG GAAAACTATT CCGTGTGGGT CTGCTTCGCC AGCGACACCA ATCCAGAGCT TTGTGAAACA CTCAAGAACC ACATCGAATC GGGCGGCGAT TTCTCGGAAA CCGTCAACAA CGAATTGTTC GAACAGTACT TCCAGTGGAA AGCCATCCAG GATGCTATTC TGGAAAGCGG CGGCGTCATG TGCCGCGAAC TTGGCGCTGT TCAGGAAACA CTTGAAGCGG CCGAGCGCGA CACCGCTGCC TATGGGAAAG CTCTGGAAGG TGCGAGCCAC GAGCTGACCG CAACTCCGGA CGCACCGGGC ATGAAAAAAC TTGTCGAGAG CCTTGTCTCA GCGACCGCCC GCATGCAGCG TCGCAGCCAG GCCCTCGAGG ACCGCTTGCA GGCGACCTCG AACGAAGTCA CCCAGCTTCG GACCAATCTG GAAAAAGTCC GTGAAGAAGC GATGACGGAT GCCCTCACCG GCATTGCCAA TCGCAAGCGT TTTGACGAAT CCCTGCGCCG CGCCCGCCGC GACGCGGATA CCAAGAAACA GCCGCTCAGC CTGATTCTTT GCGATATCGA TTTCTTCAAG CGCTTCAACG ACACCTGGGG CCATCAGACC GGCGACCAGA TTATTCGCTT TGTAGCCGGC TGCCTGACCC GACATGCTGG CGAAAATCAC CTTGTCGCCC GATATGGTGG TGAGGAGTTT GGAATCGTGA TGCCGAACAC CGCACCGAAT GTCGCCGAAC AGGTTGCCGA AAAAATTCGC AAGACCGTTG AGTCGAAAAA ACTTCTTCGC AAATCGACCA ATGAAGACTT GGGCAATATC ACCGTTTCTC TCGGGATCGC GACCTATCAC GAAGGCGAAT CGATCGAGGA ACTGATTGAA CGCTCGGACA CCAATCTTTA CCGATCCAAG ACCGAAGGGC GCAACCGGAC CACGGTCGAC AACAGCCGCG CCCCGTCTCG CAGCGCGGCC TGA
|
Protein sequence | MNGRLLGKEG REFALKALDL MDQFGVAPTP ENYSVWVCFA SDTNPELCET LKNHIESGGD FSETVNNELF EQYFQWKAIQ DAILESGGVM CRELGAVQET LEAAERDTAA YGKALEGASH ELTATPDAPG MKKLVESLVS ATARMQRRSQ ALEDRLQATS NEVTQLRTNL EKVREEAMTD ALTGIANRKR FDESLRRARR DADTKKQPLS LILCDIDFFK RFNDTWGHQT GDQIIRFVAG CLTRHAGENH LVARYGGEEF GIVMPNTAPN VAEQVAEKIR KTVESKKLLR KSTNEDLGNI TVSLGIATYH EGESIEELIE RSDTNLYRSK TEGRNRTTVD NSRAPSRSAA
|
| |