| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1311 |
|---|
| Symbol | |
|---|
| ID | 4284850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1431923 |
|---|
| End bp | 1432399 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638140790 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_756541 |
|---|
| Protein GI | 114569861 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.16373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.582518 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGA GCACAAAAGG ACGCTATGCG GTGATGGCCA TGGCCGACCT GGCGGATGCC
GCCGAGGCTG GCCCGGTTAC CTTGAGCGAC ATTGCCTCGC GCCAGTCGAT TTCATTGTCC
TACCTCGAAC AATTGTTCGC AAAACTGCGC CGCGCCGACA TCGTGTCGTC CGTGCGGGGG
CCGGGCGGTG GTTACCGGCT CAGTCGAACG GCCAGCGAAA TCCGGATTTC CGACATCATC
CTGGCTGTGG ACGAGCCTCT GCGCGCGACT CGCTGCTCCG AGGCCAAGGG GTGTCTGAGC
GATGGCCGGC GCTGCATCAC CCACGACCTG TGGGACGAGT TGGGGCGGCA CATATATCTG
TACCTGTCAT CGGTCACCCT GGAGGACGTG CTGGAGCGGC GGCTGTTCGG GTCTGCCAAT
GGCGCGACCG GACGCCTTGC GCCGGCAGCG ACCAGTTCGA CCCGCGCGGC TGAATAG
|
|---|
| Protein sequence | MKLSTKGRYA VMAMADLADA AEAGPVTLSD IASRQSISLS YLEQLFAKLR RADIVSSVRG
PGGGYRLSRT ASEIRISDII LAVDEPLRAT RCSEAKGCLS DGRRCITHDL WDELGRHIYL
YLSSVTLEDV LERRLFGSAN GATGRLAPAA TSSTRAAE
|
|---|
| |