| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1296 |
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| Symbol | |
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| ID | 4284442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 1411164 |
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| End bp | 1413836 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638140775 |
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| Product | ribonuclease E |
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| Protein accession | YP_756526 |
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| Protein GI | 114569846 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.17459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.956429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGA AAATGCTGAT CGACGCAGGT CATCCCGAGG AGACCCGCGT CGTCGTACTC
GACGGTTCGA AGGTTGAGGA TTTTGATTTT GAAGCGGCCG CTCGCCGCCC CATCCGCGGC
AACATCTATC TCGCGAAAGT AACGCGGGTC GAGCCGTCGC TGCAGGCGGC CTTCGTGGAA
TATGGTGGCA ATCGTCACGG CTTCCTGGCC TTCAATGAAA TCCACCCGGA CTATTATCAA
ATCCCCTTCG AGGACCGTCA GGCCCTCGCC GAGGAAGAAG CCTCTGCGGC TGACGACGAG
GACGACGAGG TCGAAGAGAC CAAGTCCGAA TCGGTGCGGT CTGCCGACAA TGCCTCCGAG
GATGCGGACG GCGAAGGTGA GGCCGAGGCA CCTGAAACCA TTGGCGATGA CAGCGAAGAC
GACGACATCA GCGACCAGCA GGCTGCCCGC CGCCGTCGCC AGATGTTCCG CAAATACAAG
ATCCAGGAAG TCATCAAACG GCGCCAGATC CTGCTGGTCC AGGTGGCCAA GGAAGAGCGC
GGCAACAAGG GCGCAGCCCT GACGACCTAT CTGTCGCTGG CCGGTCGCTA TTGCGTGCTG
ATGCCGAACA CGCCTCGCGG CGGTGGCATT TCCCGCAAGA TTTCCAATGC CTCTGACCGC
AAGCGTCTGA AATCTGTTGT ATCCGAGCTC GAACTGCCCA AGGGCGTCGG CTTGATCATC
CGCACGGCGG GTGCCTCGCG CACCAAGACC GAGATCAAGC GGGATGCCGA CTACCTGCTG
CGCCTGTGGA CGAATATCCG CGAGCTGACG CTGAGTTCGG TGGCACCGTC GCTGATCTAT
GAAGAAGGCA ATCTGGTCAA ACGCGTCATC CGTGACCTGT ATGACAAGGA AATCGACTCG
GTCCTGGTGG AAGGCGAAGA GGCCTACAAG GAGGCGAAAG CCTTCATGAA GATGCTGATG
CCGAGCCATG CCAAGAAGGT TCAGCACTAC AAGGAAGCCG TCCCGCTCTA TCTGCGCCAT
CAATGTGAGG CCCAGCTCGA GGCGATTTAT TCTGATGTCG CCCCGCTCAA ATCCGGCGGC
TATCTGGTGA TCAATCCGAC CGAGGCCCTG GTCTCGATCG ACGTGAACTC CGGCAAATCG
ACGCGCGAGC GGAATATTGA AGCCACCGCG CTGAAAACGA ATCTGGAAGC CGCAGCGGAA
GCTGCGCGCC AGATGCGCCT GCGTGACCTG GCCGGTCTGA TCGTCATCGA CTTCATCGAC
ATGGACGAGA ACAAGAATAA TCGTGCCGTC GAGAAGAAGA TGAAGGACAT GCTCAAGCGT
GACCGGGCCC GCCTGCAAGT GGGTCGGATC TCGCAATTCG GGCTGATGGA AATTTCCCGC
CAACGCCGCC GGTCCAGCCT GCTCGAAGGC TCCACGACGA CCTGCCCGAC CTGTAAGGGC
AGCGGCCATC TGCGTTCGAC TGAATCGAGT GCACTGGTTG CCCTGCGTGG CTTGGAAAAG
GAAGGCACAC GCGGCCGCGC CAAGCGGATT CGCATTTCGG TGCCAACCGC CGTCGCGATC
TATCTGTTGA ACGACAAGCG CGATCACCTC CTGATGATCG AGCAACGCTT TTCGATGAGT
ATCGCCGTCA CGGCGGACGA CACGATCCTG GCACCGGAAT TCTCGATCGA AGCGCTGGAA
AACCGCGAAC CGGGCGAAGA GCTTGTCATG GCCCCGCTGT CGGTCGAATC GATCGAGGAG
ATCGAGATCC CGGACGTTCC GGAAGAGGAC GACTCGGACA CTGACGACGA ACAGGAAGGC
CGCGAAGCCT CGGGTGGGCG CCGTCGCCGT CGTCGCCGCC GTCGCAAGCC GTCTTCCGAT
GACACCACGG CCGCCATGGA AGTGGTCAAT GTCGAGGCCG AGGACAGCGA TGAGGGCGAC
AATGCCGACA AGGCAGAAAG CCGTCGTGAT GGGTCGGGTG AGGACGATGA TGACCAACCC
CGTCGTCGCC GCCGTCGCGG CCGGCGTGGT GGCCGTGGTC GTCGCCGGAC CGAAGGCGAG
ACCAATGGCG AGGAAGCCGT AGCCGGCGAA GCGTCAGCCG ACGCGCCAGC CTCAGATGCG
CCGGCTTCCG ACACCGCCAA TCCGGACAGC TCAGCGACCG AAGCGTCGGC CGAAGCCGAA
CCGTCTGCGG ACGCGGCTGA GCAAGCCCCC AAGCGCAAAC GCGCGCCGCG TCGGCGTTCG
ACAAAGGCAG CGACAAATGA CGAGGCTGCG GCTTCGTCCG ATGCGGAAAC CAGCACCGAG
CCAGCCGCAG ATGCGGGCCC GGCCGACGCT GTGGCAGAGG ACGCGCCGAA GAAACGGACC
CGCCGCCCGC GCAAAAAGGC TGCAGATCCG GCCCCTGAGG CTGCCGATAC CGAAGCAGCA
GCGACCGAAG CGGACAGCCC GGCCGCAGAA CCGGCCAAGG CTGAAGAGAC TCCCAAGCCG
AAGCGTCGTA CCCGACGCAA GAAGGTTGAA GAGCCTGTCG CAACGGACGA GCCGGCGGCT
GAAGCATCCG CGCCGGCCCC GCAGGCGGAC CCGACGGAAT CCGGGGCCGA GCCACGTGAT
ACCCAAGCCG ACAAGACGGA CGAGGCTGCC GAAGATGATG GCAAGCCGAA GCGCCGCGGT
TGGTGGAACC GGACCGGATT GTTCGGAAAC TGA
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| Protein sequence | MSKKMLIDAG HPEETRVVVL DGSKVEDFDF EAAARRPIRG NIYLAKVTRV EPSLQAAFVE
YGGNRHGFLA FNEIHPDYYQ IPFEDRQALA EEEASAADDE DDEVEETKSE SVRSADNASE
DADGEGEAEA PETIGDDSED DDISDQQAAR RRRQMFRKYK IQEVIKRRQI LLVQVAKEER
GNKGAALTTY LSLAGRYCVL MPNTPRGGGI SRKISNASDR KRLKSVVSEL ELPKGVGLII
RTAGASRTKT EIKRDADYLL RLWTNIRELT LSSVAPSLIY EEGNLVKRVI RDLYDKEIDS
VLVEGEEAYK EAKAFMKMLM PSHAKKVQHY KEAVPLYLRH QCEAQLEAIY SDVAPLKSGG
YLVINPTEAL VSIDVNSGKS TRERNIEATA LKTNLEAAAE AARQMRLRDL AGLIVIDFID
MDENKNNRAV EKKMKDMLKR DRARLQVGRI SQFGLMEISR QRRRSSLLEG STTTCPTCKG
SGHLRSTESS ALVALRGLEK EGTRGRAKRI RISVPTAVAI YLLNDKRDHL LMIEQRFSMS
IAVTADDTIL APEFSIEALE NREPGEELVM APLSVESIEE IEIPDVPEED DSDTDDEQEG
REASGGRRRR RRRRRKPSSD DTTAAMEVVN VEAEDSDEGD NADKAESRRD GSGEDDDDQP
RRRRRRGRRG GRGRRRTEGE TNGEEAVAGE ASADAPASDA PASDTANPDS SATEASAEAE
PSADAAEQAP KRKRAPRRRS TKAATNDEAA ASSDAETSTE PAADAGPADA VAEDAPKKRT
RRPRKKAADP APEAADTEAA ATEADSPAAE PAKAEETPKP KRRTRRKKVE EPVATDEPAA
EASAPAPQAD PTESGAEPRD TQADKTDEAA EDDGKPKRRG WWNRTGLFGN
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