Gene Mmar10_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1290 
Symbol 
ID4284436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1405131 
End bp1406981 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content62% 
IMG OID638140769 
ProductATP-dependent DNA helicase RecQ 
Protein accessionYP_756520 
Protein GI114569840 
COG category[L] Replication, recombination and repair 
COG ID[COG0514] Superfamily II DNA helicase 
TIGRFAM ID[TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.289447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA AAACAGGGGC TCGTGATCGG ATCGATGTCA TGCTCCAAAC CCGCCCTGAA 
GACATGCTGC GTGAGACGTT CGGCTTTCCT GGGTTTCGTC CGGGACAGTC GGATATCGTC
GACCACATCC TTGCCGGACG TCCGACACTG TGTGTGATGC CGACCGGGGC CGGCAAATCA
ATCTGCTACC AGCTTCCGGC GCTGATGCTG GACGGGATGA CGGTCGTGAT CTCGCCGCTG
ACAGCGCTGA TGGATGACCA GGTCGCCGCG CTGCAGGCCA ATGGTGTCGC CGCCGCCGCG
ATTCATTCCG GTCGTGATCG CGTCGACAAT GTCGAGACCT GGCGCCAGGT CCAGTCGGGT
GATGTGCAAT TGCTCTACCT GTCTCCGGAA CGCTTGATGA CGCCGCGCAT GCTGGCTGCG
CTGGAAGCGC TGGATCCGGC CATGTTTGTC GTCGACGAAG CGCATTGCAT TTCCAAATGG
GGGGCGAGTT TCCGCCCGGA ATATGAAGAC TTGTCGAAAT TGTGCGCCCG CTTCCCGTCG
GCGCGGCTGG CGGCCTTTAC CGCGACAGCC GATGAGGCGA CGCGCCAGGA CATTGCCGAC
AAGCTGTTCG GTCAGGGGGG CGAGATCGTG GTGCACGGTT TCGATCGCCC GAATCTCACT
CTCGGCGTCG CCGCCAAGGC GTCGTGGAAA TCCCAGCTGC TGGAATTCCT TGATGACCGC
CGTTCCGAGT CCGGCATCAT CTATTGCCTG TCACGCAAAT CGACCGAAGA GGTTGCCGGC
TTGTTGCGCG AGGAGGGGTT CAACGCCTTG CCTTACCATG CCGGCCTGTC TCCCGAGACC
CGGCGCGAGA ACCAGGAACG CTTCATGGCC GAGGAAGCGG TCGTGATGGT GGCGACCATC
GCCTTCGGGA TGGGCATCGA CAAGCCGGAC ATCCGCTACG TCTTCCATCT TCACATGCCC
GGTTCCATGG AGGCCTATTA TCAGGAAATC GGTCGCGCTG GCCGGGATGG CCAACCTGCG
GAAACCATGA TGCTTTTCGG CTTGTCCGAT GCCCGCATGC GGCGCCAGTT CATCGATCAG
GATGGTGAGG ATGGCGAGCA CAAAAGGCGC GAGCACAAGC GGCTCGACAG CTTGCTGGCC
TACTGCGAAG CGACCCGTTG TCGCCGCATC TCACTGCTTG CCTACTTCGG CGAAACCGGC
CGGCAGGCCT GTGGAAATTG TGACCTGTGT CTCGACCCGC CGGTGCTGAT TGACGGCAGT
CTGGACGCAC AAAAACTGTT CTCGGCCATC CTCAGAACCG GGGAAATGTT CGGCGCCGCC
CACGTCATCG ACGTTCTGCG CGGTGCCGAC ACCGAGAAGG TTCGTGCCCG GGGCCATGAT
AGTCTTCCGA CCTATGGGGT CGGCTCAGAC CGTCCCAAAC CGTTCTGGCA GGGTTTGATC
CGACAGAGCG TGGCGGCGGG TCTGATTGAG ATAGATATTC AGGGGTTTGG TGCGCTCAAG
CTGGCGGGTG AGGCCCGCGC GGTCCTGAAA GGCGAGCAGA CTTTCAAGAT CCGTGAGATC
AGCACCAAAC CGCCCAAGTC GCGGCGCGCT CCCAAGTCGG CGAGCGTAGA CCCGTCGACC
GTGGATGCCA CACTGCTTGC GGCGTTGAAG GCCAGGCGGC GCGAACTGGC CGCCGAGCGT
AACGTGCCGG CCTATGTTGT CTTTTCCGAT GCGACACTGA TCGACATGGC GCAGCTCCGA
CCGACCAATC TGGAGCTCAT GGCGTCAGTC AACGGGGTCG GGCCGAAGAA GCTTGAGACA
TTCGGACAGA TTTTCCTCGA CGTGCTGCAG GAGCATGGCG GACCCAATTG A
 
Protein sequence
MSRKTGARDR IDVMLQTRPE DMLRETFGFP GFRPGQSDIV DHILAGRPTL CVMPTGAGKS 
ICYQLPALML DGMTVVISPL TALMDDQVAA LQANGVAAAA IHSGRDRVDN VETWRQVQSG
DVQLLYLSPE RLMTPRMLAA LEALDPAMFV VDEAHCISKW GASFRPEYED LSKLCARFPS
ARLAAFTATA DEATRQDIAD KLFGQGGEIV VHGFDRPNLT LGVAAKASWK SQLLEFLDDR
RSESGIIYCL SRKSTEEVAG LLREEGFNAL PYHAGLSPET RRENQERFMA EEAVVMVATI
AFGMGIDKPD IRYVFHLHMP GSMEAYYQEI GRAGRDGQPA ETMMLFGLSD ARMRRQFIDQ
DGEDGEHKRR EHKRLDSLLA YCEATRCRRI SLLAYFGETG RQACGNCDLC LDPPVLIDGS
LDAQKLFSAI LRTGEMFGAA HVIDVLRGAD TEKVRARGHD SLPTYGVGSD RPKPFWQGLI
RQSVAAGLIE IDIQGFGALK LAGEARAVLK GEQTFKIREI STKPPKSRRA PKSASVDPST
VDATLLAALK ARRRELAAER NVPAYVVFSD ATLIDMAQLR PTNLELMASV NGVGPKKLET
FGQIFLDVLQ EHGGPN