| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1281 |
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| Symbol | |
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| ID | 4284007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 1392059 |
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| End bp | 1394323 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638140760 |
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| Product | ribonuclease R |
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| Protein accession | YP_756511 |
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| Protein GI | 114569831 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.106141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCA AGACTGAGTT TGATGCCGGC CTGACCCGCG AGGCGGTCAT TGATGCCGTC
CGCGAGGGTG GTGGCGAGTT TGGAAAGCGT GAACTGGCAC GGGCGATGTC CCTGAAAGGC
AGCGATGCCA AGCGGGCGCT CAATGACGCT CTCGCCGCCC TGACCGAAGA TGGCACCCTG
ACCCGCTCCA ACAGCAAGAC CTACTCGCTT CCCGGCGCCC TGCCAGCGGT TTGCGTCGTA
CAGCTGATCG GTCGTGACAA TGACGGCGAG CTGCTGGCCG AACCAGTCCG CCCGGACCGC
CACGCGCCCA TGATCCGCCT GGCCCCCGGC GAAGGCGCCG GCGGCAAGGG CACGCCCGCC
ATCGGCATTG GCGACAAGGC GCTGGTCCGT CTCGCCCTGC AGGAAGATGG CAGCTACCAG
GCGCGGCTGA TCAAGAAGCT CGGCCAGAGC GCGCACAAGC TGTTGTGCAT GCTGCGCAAG
CCGCAATCGG GACCCTTCCG TCTGCTGCCG GTCGACCGGC GCTCGCGCCA TGAGCTGGTG
CCGGCGAAGG GCGAGGCTGA AAAGGCTCAC GATGGCGATC TGGTCCTGTG CGAGATCGCC
AAGGAACGCC GGCATGGCCT GAAGACCGCC CGGATTGTCG AGGTCGTCGG CGATGCCAGC
GCGCCAGGCG CCGGCAGCCT GATCGCGCTT TATTCGCATG GGGTTCCCCA GGGATTTTCC
GAGACCGAGC AGCGTGAGGC CGACGAGGCC CCGACGGCAC GGCAGGGCAA GCGCGAAGAC
CTGCGCGCCC TGCCCCTGAT CACCATCGAC CCTGACGACG CCAAGGACCA TGACGACGCC
GTCTGGGCCG CGCCTGACGA TGATCCCAAG AACCCCGGCG GCTGGCAGGT CATCGTCGCC
ATTGCCGATG TGGCGGCCTA TGTGACACCC GGCAGCGCGC TCGATCGCGG CGCTTTCAAG
CGTGGCAATT CGGTCTATCT GCCGGACCGC GTCGTGCCGA TGCTGCCCGA ACGCCTGTCC
AACGATCTTT GCTCATTGCG CGAGAAGGAG GACCGGCCCT GCCTGGCGGT CCGGATGGTG
TTCGACAAGT CCGGCAACAA GCGCTCGCAC ACTTTCATGC GTGGCTGGAT GCGCTCGGCC
GCCAAGCTCT CCTACACACA AGCCCAGGAC GCCATTGACG GCCGCGATGG CGGTCCGGCG
AATGCGCTGC TCGACGACGT GCTCAAACCC TTGTGGGGCG CCTATTTCGC CGCCCGGGAA
GCGCGTGGTC GCCGCGAACC GCTGGAGATC GACGCACCGG AGCGCCGGGT CCGTGTCGGC
GAGGATGGTC AGGTGATCGG GGTGGAAACC CGCCAGCGCT TCGACGCCCA CAAGCTGGTC
GAGGAGTTCA TGATCCAGGC CAATGTCTGC GCCGCGGAAA CGCTGGAGCA GAAACGCACG
CCGCTGATCT ATCGCGTCCA CGAGCCGCCC TCACGCGAGA AGATCGACGC GCTGTCCGAC
TTCCTGCCGA CCGTCGGCAT GAAATGGGCG AAAGGCAACA AGGTCGAGAC CGGGCGTTTC
AATCAGTTGC TCAAGCAGGC CAAGAGCTCC GAGCACTATG AAACCATCAA TGTGGTGGTC
CTGCGCAGCC AGTCACAGGC GGTCTATGAC ACCGAGAACG AGGGGCATTT CGGCCTGAAC
CTGCAGCGCT ATGCCCATTT CACCTCGCCG ATCCGACGCT ATGCCGACCT GACCGTGCAC
CGGGCCCTGA TCCGGGCGCT GGGACTCGGC GATGACGGCC AGAGCGATGA GGAACGCAGC
CGCCTGACCG TGATCGCGGA AGAAATTACC CATGCGGAAC GACGGGCCAT GGCCGCCGAG
CGTGATGCGG TCGACCGTTT CATTGCCGCC TATCTGGCCG ACAAGATCGG CGCCGAGTTC
GCCGGCCGGA TCACCGGGGT GACCCGGTTT GGCTGCTTCG TGAAGCTGGA CGAGACCGGC
GCTGACGGGC TGGTACCGAT CTCCCGGCTG GGCGAGGAGC GTTTCGAGCA CGACGAGAAA
CTCCACGCCC TGGTCGGCCT GCAGACCGGA TCGCGCTACC GGCTGGGCAT GCCGGTCATG
GTGCGCATTG ATGAGGCCCA GCCGGTCACC GGCGGCCTTC TGCTCGACAT GCTGACCGAG
GCTGAAAAAG GCGAGCGTCC GAGCGGTCGC CGGCGTCCCA AATCCGGCGG ACCACCCAAT
GGTCGCCGCT CCGGCAAGCC GTGGAAGAAG GGGCGACGCC GGTGA
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| Protein sequence | MAGKTEFDAG LTREAVIDAV REGGGEFGKR ELARAMSLKG SDAKRALNDA LAALTEDGTL
TRSNSKTYSL PGALPAVCVV QLIGRDNDGE LLAEPVRPDR HAPMIRLAPG EGAGGKGTPA
IGIGDKALVR LALQEDGSYQ ARLIKKLGQS AHKLLCMLRK PQSGPFRLLP VDRRSRHELV
PAKGEAEKAH DGDLVLCEIA KERRHGLKTA RIVEVVGDAS APGAGSLIAL YSHGVPQGFS
ETEQREADEA PTARQGKRED LRALPLITID PDDAKDHDDA VWAAPDDDPK NPGGWQVIVA
IADVAAYVTP GSALDRGAFK RGNSVYLPDR VVPMLPERLS NDLCSLREKE DRPCLAVRMV
FDKSGNKRSH TFMRGWMRSA AKLSYTQAQD AIDGRDGGPA NALLDDVLKP LWGAYFAARE
ARGRREPLEI DAPERRVRVG EDGQVIGVET RQRFDAHKLV EEFMIQANVC AAETLEQKRT
PLIYRVHEPP SREKIDALSD FLPTVGMKWA KGNKVETGRF NQLLKQAKSS EHYETINVVV
LRSQSQAVYD TENEGHFGLN LQRYAHFTSP IRRYADLTVH RALIRALGLG DDGQSDEERS
RLTVIAEEIT HAERRAMAAE RDAVDRFIAA YLADKIGAEF AGRITGVTRF GCFVKLDETG
ADGLVPISRL GEERFEHDEK LHALVGLQTG SRYRLGMPVM VRIDEAQPVT GGLLLDMLTE
AEKGERPSGR RRPKSGGPPN GRRSGKPWKK GRRR
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