Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1261 |
Symbol | |
ID | 4283802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1374733 |
End bp | 1377669 |
Gene Length | 2937 bp |
Protein Length | 978 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638140740 |
Product | ribonucleotide reductase-related protein |
Protein accession | YP_756491 |
Protein GI | 114569811 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.905113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00163098 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGGTCT TCGGTCGCAT TGCCCAATTC ATCGCCGACT CCGATCTCGG CGGTGTCCCC GAAGCCCGGC AGCTGGGCAG CATTGATGCC GATGATGGCT CATTGTCGGG ATCAGATCGC GCACTGGTCG CCCCCCCCGG GTGGAGCGAT ACCGCGGTTC AGGGCCTGGC CGATCTGCTC GACACACCCC GCCCGCAAAC CACGGAACCG CGCAAGAGTG CCAAGACAAT TGGCACACTG ACCCCGTCCT GCGGCATTGG CGAAGAGCGC GCGCTGGAGA CCGGCATGCC TGCCGTCGCC CGTCGCCTCG CCGGCTCACT CGCCTGGTCA GCAGCCCGCC AGGGCGCTTT CACAACAGAC GCGGATGCTG ACCTGTTTGC CGATGAATTG TCCGCCAGCC TGACCGGCCG GCTGGTGATG CCCGATGCCG GACTGATCCG CCATGGCGGC GTTGATTGGG CCTATGGTGA CCCGGCGACG TCCACCTCCG CCCGGTCAGC CCCGTTGACG ATCCGGGTCA ATTCGCAGCA AGCGCCCGGC CAGTTGCGAC GCGTCGCCGA GACCGCCCTG CGCGCCTCCG TGCTTGATGT CGGTGCCCGG GTCACCCGTG ACCGCCTGGA GGCTATCGGC GAAGCCGTGC GCCGTTGCTC CGGCGATATC GAGGATTGCT TCGACCCGCG CCGCAATGCC GCGCTTTCGC GTGCCATGCG CCGGGCCCTG AAAGACGGTG TCCCCGAAGA GGCCGTCGAA CGCGCTCTCG CGCTGGCCCG CCAGGGAACC GATGACGATG CCCTGTCCGA ACTCATTCCT GACCCTGTTG AGCCCCGCCC TGCGGTACTG CATGTACCGC GCGCCTTTAC CCGGGCCGTG GCCGACGACG AGGCGTGGAC CTTCGAACAG GATGGCGGCG TGGTCCGTGC CCGAGATTTC CGGACCGGCA TCGCGCGGAC CATCTGGAGT TTCGGGGGGC CATCTCTTGC GTTCAATGCC AGCCCGGAAG AAACCGGCCC GACCATCCAT TTAAACCTGC CCGCCTTTTT CGGTGACGAC CGGGAGTTTC AGGCCGGGAT TTTCTGCGAC ACAGTCCGCT ACTGGGCCAT TGCGCTGACC TTGAGCGCCC CGAAGGGTGC CGGTTCAGCC GGCTCCATAG CCCTGACCGG GCTGGGTGCC TTGCTGATGG CCGGTGGACA GGCCTTTGGC AGCCAAGAAG CCCGCGAAAC AGCCGCGGCT CTCGGTCAGC TGGCAACCCG CACCTTGCGC GACGTGGCAA TGGAGACAGG TGCCGCGGCA CCCGGTCTCG GCGAAACGCC TCGTCTGGAC GCCTTGCCGG ACAGTTTCTG CCAGCTTGCC GAATACCTGT CCAAGGCCGC TCCCCCCTTC CTGCCGAAAG CGGCCCTCGC CCGGCCTGGC CCGACCCTGA TCTGCCAGAC GCCGGCGTCG GAGATCGCTG GCTTGCTTGA CGCGGACAGT CTGGGAGCCC TGCCGGTCCG CTCAGCTGTC ACCGCCGATG CCGGCATGGC GGGTGGGCAA CGCTTGCGAG ACTGCGCCCG GACCGGATTG TTGACGCTTG GCTGCTCCGT GACCGATGTC GAGCGGGCCG AAGACCACGC TGCCGGCCAT GGCAGCCTGC GCGGCGCTCC GGGAATCTCG CTCGAGGACT TGATGGAACG CGGCGTCCCT GTCGCCGCAC TGGAACGTCT CGAGGACTCC ATCGCCGAAG GTGCGTCGGT CCGCCACGCG CTCAATCGCT GGACACTGGG CGACCGGGTC TGCCGCGATG CGCTCGGCCT GACCAGCGAC GTTATCGAAC GTCACGGCAA CGCCTTGTGC AACGCAATCG GCTACACCGA AGATGATATC CGCGCCGCAG ATGCCCATGC GCATGGCACC GGCGATCTGG CCGGTGCACC GGACCTTCCG GCCCGGATCC GCGCAGTGTT CGAGACCCCG AGCCTTCAGG ACCAGATGAT GATGGCGGCG GCCATCGAGA ACCAGATCAG CGGCTATTGC CGCATGGAGT TGTCGCTGGA CGGCAATGCC ACCATTGACG ATGTCGCTGC GCTGATCGAC CTGGGTGGCG AGCTGGGCCT GCGGGACCTC TCGATCCGCC GCACCGCCTC GGGACTGTTC GACCTGCTCC CATCCATCGA TTTCGACAAG GGCGACTACG CGGCTGAAGC AGAGCCCGTC GAGCGGATCG TTGAGCGGAC GGTCGAGCGG GTGGTCGAAA AGCCCGCCGC GCGCCGCAAG CTCCCGGACC GTCGCAAGGG CTATATCCAG AAAGCGACCG TCGGTGGCCA CAAGGTCTAT CTGCATACCG GCGAATTTGA CGATGGCGAG CTCGGCGAGA TCTTCATCGA CATGCACAAG GAAGGCGCGG CCTTTCGCTC GCTGATGAAC AATTTTGCCA TCGCGATCTC GATCGGCCTG CAATACGGCG TGCCGCTCGA AGAATTTGTC GACGCCTTCG TCTATACCCG GTTCGAGCCG GCCGGTGCGG TCCAGGGCAA TGACTCGATC CAGCACGCCA CCTCGATCCT CGATTACCTG TTCCGCGAAC TGGGCGTGTC CTATCTGGGA CGTGACGACC TGGCCGAAAT TTCGCCGGAC AAGGCTGATC CCGGCGGTCT GGGGCGCGGA GTCGAGGAAG AAAAGCTGGC GCGGGAAGAT GCCGCCAAAT TCATTTCCCG AGGCTTCTCG CGCGGCCAGG TCCCTGACAA TATCCTGATG TTCGCGAATG CGCCCAAGAA GGCGGCGACC GGCGGCGATG CCACAACCGG CCACTATGAG ATCGAGGACC AGGCGGCCAG CGGATCAAGC TCGCGCGACA TCTCCGGCTA TACCGGCGCG CCCTGCCCCG AGTGCGGACA TTTTACCGTG GTCGAGAACG ACAATGGCGG GCAGACCTGC GACGCGTGCA ACTGGAGCGG TGGCTGA
|
Protein sequence | MQVFGRIAQF IADSDLGGVP EARQLGSIDA DDGSLSGSDR ALVAPPGWSD TAVQGLADLL DTPRPQTTEP RKSAKTIGTL TPSCGIGEER ALETGMPAVA RRLAGSLAWS AARQGAFTTD ADADLFADEL SASLTGRLVM PDAGLIRHGG VDWAYGDPAT STSARSAPLT IRVNSQQAPG QLRRVAETAL RASVLDVGAR VTRDRLEAIG EAVRRCSGDI EDCFDPRRNA ALSRAMRRAL KDGVPEEAVE RALALARQGT DDDALSELIP DPVEPRPAVL HVPRAFTRAV ADDEAWTFEQ DGGVVRARDF RTGIARTIWS FGGPSLAFNA SPEETGPTIH LNLPAFFGDD REFQAGIFCD TVRYWAIALT LSAPKGAGSA GSIALTGLGA LLMAGGQAFG SQEARETAAA LGQLATRTLR DVAMETGAAA PGLGETPRLD ALPDSFCQLA EYLSKAAPPF LPKAALARPG PTLICQTPAS EIAGLLDADS LGALPVRSAV TADAGMAGGQ RLRDCARTGL LTLGCSVTDV ERAEDHAAGH GSLRGAPGIS LEDLMERGVP VAALERLEDS IAEGASVRHA LNRWTLGDRV CRDALGLTSD VIERHGNALC NAIGYTEDDI RAADAHAHGT GDLAGAPDLP ARIRAVFETP SLQDQMMMAA AIENQISGYC RMELSLDGNA TIDDVAALID LGGELGLRDL SIRRTASGLF DLLPSIDFDK GDYAAEAEPV ERIVERTVER VVEKPAARRK LPDRRKGYIQ KATVGGHKVY LHTGEFDDGE LGEIFIDMHK EGAAFRSLMN NFAIAISIGL QYGVPLEEFV DAFVYTRFEP AGAVQGNDSI QHATSILDYL FRELGVSYLG RDDLAEISPD KADPGGLGRG VEEEKLARED AAKFISRGFS RGQVPDNILM FANAPKKAAT GGDATTGHYE IEDQAASGSS SRDISGYTGA PCPECGHFTV VENDNGGQTC DACNWSGG
|
| |