Gene Mmar10_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1221 
Symbol 
ID4286474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1330098 
End bp1330967 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content68% 
IMG OID638140701 
Productdimethyladenosine transferase 
Protein accessionYP_756452 
Protein GI114569772 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.675859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.381466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG ACCAGCTGCC GCCGCTCCGG GATGTCATCG CCAGCCATGA TCTGGGCGCA 
AAGAAGTCGT TCGGACAACA CTTCCTGCTC GACCTCAACC TGACCGCCAA GATCGCCCGC
CTCGCCGGGG ATATGAGCCG CGACCAGGCC ATCGAGGTCG GCCCCGGCCC GGGCGGGCTG
ACCCGCGCCA TCCTCGCCGA GGGCGCGGCC TCTCTCCTGG CCGTCGAGAT GGATTCCCGC
TTCCTCGGCG CGCTGGACGA AATCAATGTC GCCTCGGGTG GGCGCCTGAC GGTCGAACAG
GGCGACGCCC TCGAGGTCGA TGAAACCGCG CTCCTGACCG GTCCCGGCGA CAAGGTCATC
CTGTCCAACC TGCCCTATAA TGTCGGCACG CAATTGCTGA TCAAATGGCT GCAGGCAGAG
CCGATCTGGT GGCGCCGCGC CGTGCTGATG TTCCAGCGCG AGGTCGCCGA CCGGGTCGTC
GCCCAGCCGG GCGACAAGGC CTATGGTCGC CTGGCCGTGA TCTCGCAATC ACGCTGCCAG
GCCCATCTGG CCCTGAAAAT CCCGGCGCGG GCCTTTACCC CGCCGCCCAA GGTCGAATCG
GCCGTGGTGG TGCTCGATCC GCTGCCCGAG GCGCAGCAGT TCAAGGATGT TGTCGCGTTG
GAACGGATCA CGGCCTCGGC TTTCGGCCAG CGCCGCAAGA CGCTGCGCCG CAGCCTTGCC
CAGGCCGCCG GTCAGGGCGG TACCAGCGCC GACGCGCTGC TGGAGGAAGC AGGGCTGAAT
GCCGGAGATC GGGCCGAAGT GATTGATATC ACCGGCTTCC AGTCACTGGC CCGGGCCTGG
CGCGCCGCCT ATGATGCCGG ACGCGCCTGA
 
Protein sequence
MSLDQLPPLR DVIASHDLGA KKSFGQHFLL DLNLTAKIAR LAGDMSRDQA IEVGPGPGGL 
TRAILAEGAA SLLAVEMDSR FLGALDEINV ASGGRLTVEQ GDALEVDETA LLTGPGDKVI
LSNLPYNVGT QLLIKWLQAE PIWWRRAVLM FQREVADRVV AQPGDKAYGR LAVISQSRCQ
AHLALKIPAR AFTPPPKVES AVVVLDPLPE AQQFKDVVAL ERITASAFGQ RRKTLRRSLA
QAAGQGGTSA DALLEEAGLN AGDRAEVIDI TGFQSLARAW RAAYDAGRA