Gene Mmar10_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1200 
SymbolpanB 
ID4284809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1310638 
End bp1311477 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content65% 
IMG OID638140680 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_756431 
Protein GI114569751 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.305978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCC AGTCAAAGTC CCCGACCAAG GCCCGCCGTA TCACCGCCCC GGATATCCGT 
GCCCGCAAGG GCGGAGAGCC ACTTGTCTGC CTGACCGCCT ATGACGCGCC GATGGCGCGC
ATCCTCGATC CCCATTGCGA TCTTTTGCTG GTCGGCGACA GTGTCGGCAT GGTGGTGCAC
GGGCTGGACA GTACGGTCGG TGTGACGCTG GACATGATGA TCCTGCACGG ACAGGCCGTG
ATGCGCGGCG CCCGTCAGGC ACTGGTCGCG GTCGACATGC CGTTTGGCAG CTATGAGCAG
TCACCCGAGC AGGCCTTTGC CAATGCCGCA CGCGTGATGG CCGAGACCGG CTGTCAGGCG
ATCAAGATCG AGAGCGGCAC CTATGCCGCC GACACGATCC GTTTCATGGC GGCCCGCTCG
ATCCCGGTGA TCGGCCATAT CGGATTGCGT CCCCAGGCGG CCCTCGCCGA TGGCGGGTTC
AGGGCCAAGG GGCGGACCCA GGCCGAGCGC CAGCGCGTGA TCGATGAGGC CCTGGCGACG
GCCGAGGCCG GTGCCTTCGC GATCGTCATT GAGGGCGTGG CCGAGGACCT GGCGCGTGAA
ATCACCGAGA CAGTGGATGT CCCCACCATC GGAATCGGCG CTTCAGCCGC CTGTGACGGG
CAGATCCTGG TCACCCAGGA CATGCTGGGC GTGTTCGACT GGACGCCGAA ATTCGTCAAG
CGCTATGACA ATATGGCCGA GCGTACCGAT GCCGCCGTGG CGCAATTTGC CAGCGATGTC
CGCGATCGCA GCTTTCCCTC GCAGCGCGAG GTCTACACCA TGAAGCGTTC GGACGGCTGA
 
Protein sequence
MSAQSKSPTK ARRITAPDIR ARKGGEPLVC LTAYDAPMAR ILDPHCDLLL VGDSVGMVVH 
GLDSTVGVTL DMMILHGQAV MRGARQALVA VDMPFGSYEQ SPEQAFANAA RVMAETGCQA
IKIESGTYAA DTIRFMAARS IPVIGHIGLR PQAALADGGF RAKGRTQAER QRVIDEALAT
AEAGAFAIVI EGVAEDLARE ITETVDVPTI GIGASAACDG QILVTQDMLG VFDWTPKFVK
RYDNMAERTD AAVAQFASDV RDRSFPSQRE VYTMKRSDG