| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1194 |
|---|
| Symbol | |
|---|
| ID | 4285211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1307732 |
|---|
| End bp | 1308271 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638140674 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_756425 |
|---|
| Protein GI | 114569745 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCGC AACCGACGGA CGCGGCGCTC GTCGCGGCGG CCCGCTCGGG CAATGATGCG
GCCTATGCGC GGATCGTCGA CCGGTATCAG GGGGCGATCC GCGCCTTCCT GCGCCGGTTG
AGCCCCTATG ATGCGGATGC CGATGATCTG GCGCAGGAGG TCTTCCTCGC GGGCTGGACC
GAATTGCGCC GGCTGCGCCA GCCCGAGCGG TTGAAGACCT GGCTGTTCTC GATCGCCTGG
CGCAAGGCCA AGGGCCAGGC CCGGACGATG GCCCGCTCGC GCCAGCGCGA CCATGACTGG
CAGGACTTGC GCCCGGACAG CGAGACACCC CAGACCGAGC GCGCCATCGC CCTGCGGCAG
GCGCTGGCCC AGCTGCCGCC AGACCAACGC GCCGCCATCT CGCTCTGCCT GGGCGAGGGC
TGGTCGCATG GCGATGCCGC AAACGTCTTG GAAATGCCGC TGGGGACTGT AAAATCACAT
GTATTGCGAG GGCGTGCGCG CCTCGCCGAA ATCCTGGGAG TGGGTGATGG ACAAGACTGA
|
|---|
| Protein sequence | MSSQPTDAAL VAAARSGNDA AYARIVDRYQ GAIRAFLRRL SPYDADADDL AQEVFLAGWT
ELRRLRQPER LKTWLFSIAW RKAKGQARTM ARSRQRDHDW QDLRPDSETP QTERAIALRQ
ALAQLPPDQR AAISLCLGEG WSHGDAANVL EMPLGTVKSH VLRGRARLAE ILGVGDGQD
|
|---|
| |