| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1082 |
|---|
| Symbol | |
|---|
| ID | 4284212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1177982 |
|---|
| End bp | 1178986 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638140554 |
|---|
| Product | HfaB protein |
|---|
| Protein accession | YP_756313 |
|---|
| Protein GI | 114569633 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.167536 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGA CTAAGCTATT GATGGCGACA CTCGTCAGCG CGCTGGCGCT GACCGGTTGT
GCCACGACGG CCCGCACAGG TGGGGCCGAC GGTAATTATG CGACGCCAAT CGGCGGCGCG
CCGGTCACCG CCAATCCGAC GCCCTATTCC GAGGCGCTGG TCTGCCTCGC CAATTATGCC
CGCCAGCATA ATCTGCAATC GCCCCGCATC GCTGTCGGAC GGCTGGCGGA TTATACCGGC
CGGGCCTCAC TGGAAGGCGG AGCCGCGGTC ACCCAGGGCG CGTCCCTGAT GGCGATCTCG
GCCTTTGCCA AGGCAGGTGT TCGCCTGGTG GAGCGTTTTG ACACATCGGT GTCGGAGCTC
GAGCTGCGCT ACGCCAATAA TTCGCTGATC GGCGATAATG GTACCCAGCG CCAGATCCAC
GCCGCCTCCC TGCCCGGCTC CGACTATCAT CTGGTCGGCG GCATTACCGA GCTCAACTAC
AATATCCGCT CCTCGGGCAT CGACGTCCTG GGCGGCGACC GGATCGACAG CGATCCGACC
GGCGTCTTCA ATCGCCGCAT GTGGGTGATG AATATCGGCC TCGACCTGCG CCTCAACGAG
ACGCGCACGA TGGAGACCGT CGACGTCATT TCCTACCAGA AACAGATTGT CGGCCGTGAA
ATCTCTGCCG GCGTATTCGC CTTCTGGGAT GACGCGGTGA TCGATATTTC CGGCGGTGGT
CGCTCGCTCG AGCCGGTCCA GCTGGCCGTG CGTTCGGTGA TCGAACGCGC CGTGCTGGAA
ATCTCGGCGC AAATGTATGG CGTCGATCCG GCTGCAGCCT GCATCTATGC CGATCCGATC
GGCGGCAGCA CTGACGGCCA CACCAATGTT ACCGGCGGCG TCAACGCCAC CCACACCTAC
GGTCAACGGG AGACCTCCAA TGTCCAAGCG CGCAGCAATG TTGATCGCGG GCATGAGCGC
CGCGACGATC ACGTGCGCTC CTATCTTCGC GGACGATACG ACTGA
|
|---|
| Protein sequence | MIKTKLLMAT LVSALALTGC ATTARTGGAD GNYATPIGGA PVTANPTPYS EALVCLANYA
RQHNLQSPRI AVGRLADYTG RASLEGGAAV TQGASLMAIS AFAKAGVRLV ERFDTSVSEL
ELRYANNSLI GDNGTQRQIH AASLPGSDYH LVGGITELNY NIRSSGIDVL GGDRIDSDPT
GVFNRRMWVM NIGLDLRLNE TRTMETVDVI SYQKQIVGRE ISAGVFAFWD DAVIDISGGG
RSLEPVQLAV RSVIERAVLE ISAQMYGVDP AAACIYADPI GGSTDGHTNV TGGVNATHTY
GQRETSNVQA RSNVDRGHER RDDHVRSYLR GRYD
|
|---|
| |